NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCG
GAATTCCCTATTTTGTACCTCTATGTTCTGAATGCAACAGCATATACATT
CATAAAAGAAACTTTACTAAAGTTCAAAGCACACACTACACCACACACAA
TAGTAGTAGAAGACTTCAACACCTCACTCTCAGCAATGGACAGATCATTG
AAACAGAAACTGAACAGAGATACAGGGAAACTAACAGAAGTTATGAAACA
AATGGATTTAACAGATATATATATATAGAACATTTTATCCTAAAACAAAA
GAATATACCTTATTCTCAGCACTTCATAGTATCTTCTCCAAAATTGACCA
TATAATTGGTCACAAAACAAGCCCAACAGATACAAAAATATTGAAATTAT
TCCATGCATCCTATCAGATCGCCACAGACTAAGGCTGGTCTTCAATGACA
GCATAAACAATAGAAAGCCCACATACACATGGGAGCTGAACAACACTCTA
CTCAATGATAACTTTGTCAAGGAAGAAATAAATAAATTAAAGACTCTTTA
CAATTTAATGAAAATGAAGTCGCAACATACCCAAACTTATGGGATACAAT
GAATGCAGTCCTAAGAGGAAAACTCATAAGTCTGAGTGACTCCCAAAGAA
ACTGGAGAGGAGACCCCCAACCACTTGATAGGCCATGTGAAAGCTCTTGA
ACAAAAAAAAAAAAACACCCTGAAGAAAAAATGGCGAGAAAAAATTCCGG
GCGGAAAACAACCTGTGGAAACAAAAGAACA

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATCATCATCTTGACCAATCTGAAA
ATGTAGCTCCCTGGTGTAAGGTCTTCTATGCCAACCTATATAAAACTGTC
TGAGAGCATTAAGTGAGCAAAGATGAATAGCACCACTGTGCTTTGAATGT
GAAATCACTACAATAGAAAATCTATTTGCACACTTGGCACTGTCAGCTTG
GCACCCAGCTGCTGGTGCTTTTTTAAATTTTTGAACGTTATGAGATACTT
ATGAGTTAGAAACTTGATTGAAGAAGTTTGTTATTGGGGCTAGTTCTGAA
GTTTTATAGCTTGGCTCCATTTACTTCTAGTTCTCTGTTTGCATATTGCC
ATTGAAATGTAATGGAGTGGCTTTCTGCTCTAGTTAATGTGTTCTTCCCC
TTAAAGAACTGTGTGTTCTCAGGAGCTGTAATTCAAAGTGAAGACTTTCT
ACTTTAAGATGATTTTGTTACACCATTTATTACAGCAAAATAAATGCAAT
TAAGATAGGCAGTGCTGTGGACTGCGGATTTTTTTTTTTCATGACCCTCT
TCTTACTTTTTGCCTTTACACATTAAATTGANGCAAAGAACACCCCTTCT
TACNGAAGATTCTCTTTGACTAAACTTGAAAACTCCCGCAAGCCCCATTT
CCTGTTCGGCAAATCAAAATTTTCTTTTTACTGTTGGCCCCAACTTGGCG
CGCGGAATTTTCTTAAGCCCCCTTGAAACTCN

Query= MSMg01no405_k23.g1 MSMg01no405_k23.g1 CHROMAT_FILE:
MSMg01no405_k23.g1 PHD_FILE: MSMg01no405_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:44 2005
         (472 letters)



>mm_chr8_53491638_53492509
          Length = 872

 Score =  866 bits (448), Expect = 0.0
 Identities = 470/482 (97%), Gaps = 10/482 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcatcatcttgaccaatctgaaaatgtagctccctggtgtaaggtcttctatgccaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatcatcttgaccaatctgaaaatgtagctccctggtgtaaggtcttctatgccaacc 260

                                                                       
Query: 61  tatataaaactgtctgagagcattaagtgagcaaagatgaatagcaccactgtgctttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatataaaactgtctgagagcattaagtgagcaaagatgaatagcaccactgtgctttga 320

                                                                       
Query: 121 atgtgaaatcactacaatagaaaatctatttgcacacttggcactgtcagcttggcaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgaaatcactacaatagaaaatctatttgcacacttggcactgtcagcttggcaccc 380

                                                                       
Query: 181 agctgctggtgcttttttaaatttttgaacgttatgagatacttatgagttagaaacttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgctggtgcttttttaaatttttgaacgttatgagatacttatgagttagaaacttg 440

                                                                       
Query: 241 attgaagaagtttgttattggggctagttctgaagttttatagcttggctccatttactt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 attgaagaagtttgttattggggctagttctgaagttttatagcttggctccatttgctt 500

                                                                       
Query: 301 ctagttctctgtttgcatattgccatt--g---aa-----atgtaatggagtggctttct 350
           |||||||||||||||||||||||||||  |   ||     ||||||||||||||||||||
Sbjct: 501 ctagttctctgtttgcatattgccattttgcataatgccaatgtaatggagtggctttct 560

                                                                       
Query: 351 gctctagttaatgtgttcttccccttaaagaactgtgtgttctcaggagctgtaattcaa 410
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gctctagttaatgtgttcttccccttaaagaactgtatgttctcaggagctgtaattcaa 620

                                                                       
Query: 411 agtgaagactttctactttaagatgattttgttacaccatttattacagcaaaataaatg 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgaagactttctactttaagatgattttgttacaccatttattacagcaaaataaatg 680

             
Query: 471 ca 472
           ||
Sbjct: 681 ca 682


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)