MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-407K05
Chromosome	8 (Build37)
Map Location	24,239,328 - 24,239,768
singlet/doublet	singlet
Overlap gene	Ank1
Upstream gene	Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253
Downstream gene	Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1, LOC100040931, Zmat4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nek3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23954 MGI:1344371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ckap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80986 MGI:1931797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps36 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70160 MGI:1917410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl30-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19948 MGI:1321400
definition	gene_synonym : RpL30-3 note : ribosomal protein L30, pseudogene 2 pseudo : _no_value

name	Thsd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56229 MGI:1929096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpte (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234129 MGI:2446460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18408 MGI:1342274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC547006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Mrps31 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57312 MGI:1913153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI316807 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102032 MGI:2142501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc20a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20516 MGI:97851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040803 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040803
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs

name	Vdac3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22335 MGI:106922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dkk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234130 MGI:2385299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18970 MGI:97740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikbkb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16150 MGI:1338071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18791 MGI:97610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ap3m2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64933 MGI:1929214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myst3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244349 MGI:2442415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 4 Proteins

name	Ank1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11733 MGI:88024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx6-3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74561 MGI:1921811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 13 Proteins

name	Agpat6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102247 MGI:2142716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gins4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109145 MGI:1923847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Golga7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57437 MGI:1931029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sfrp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20377 MGI:892014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zmat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320158 MGI:2443497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nek3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803476 GeneID:23954 MGI:1344371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 3 transcript_id : NM_011848.2

name	Ckap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138529 GeneID:80986 MGI:1931797
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoskeleton associated protein 2 transcript_id : NM_001004140.1

name	Vps36 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794415 GeneID:70160 MGI:1917410
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 36 (yeast) transcript_id : NM_027338.1

name	Thsd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9625040 GeneID:56229 MGI:1929096
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thrombospondin, type I, domain 1 transcript_id : NM_019576.1

name	Tpte (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40549439 GeneID:234129 MGI:2446460
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane phosphatase with tensin homology transcript_id : NM_199257.1

name	Slc25a15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802645 GeneID:18408 MGI:1342274
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 transcript_id : NM_181325.3

name	Slc25a15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754951 GeneID:18408 MGI:1342274
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 transcript_id : NM_011017.1

name	Mrps31 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10181115 GeneID:57312 MGI:1913153
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S31 transcript_id : NM_020560.1

name	AI316807 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60592995 GeneID:102032 MGI:2142501
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI316807 transcript_id : NM_001012667.1

name	Slc20a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802688 GeneID:20516 MGI:97851
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 20, member 2 transcript_id : NM_011394.2

name	LOC100040803 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258523 GeneID:100040803
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs product : hypothetical protein LOC100040803 transcript_id : XM_001475299.1

name	Vdac3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755966 GeneID:22335 MGI:106922
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : voltage-dependent anion channel 3 transcript_id : NM_011696.1

name	Dkk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485763 GeneID:234130 MGI:2385299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dickkopf homolog 4 (Xenopus laevis) transcript_id : NM_145592.2

name	Polb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21729748 GeneID:18970 MGI:97740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), beta transcript_id : NM_011130.1

name	Ikbkb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469100 GeneID:16150 MGI:1338071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibitor of kappaB kinase beta transcript_id : NM_010546.1

name	Plat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679374 GeneID:18791 MGI:97610
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasminogen activator, tissue transcript_id : NM_008872.1

name	Ap3m2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374145 GeneID:64933 MGI:1929214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex 3, mu 2 subunit transcript_id : NM_029505.2

name	Myst3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487238 GeneID:244349 MGI:2442415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MYST histone acetyltransferase (monocytic leukemia) 3 transcript_id : NM_001081149.1

name	LOC100042253 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258561 GeneID:100042253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 4 Proteins product : similar to Lsm6 protein transcript_id : XM_001477766.1

name	Ank1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13624296 GeneID:11733 MGI:88024
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 1, erythroid transcript_id : NM_031158.1

name	Nkx6-3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383172 GeneID:74561 MGI:1921811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 13 Proteins product : NK6 transcription factor related, locus 3 (Drosophila) transcript_id : XM_486090.3

name	Agpat6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350728 GeneID:102247 MGI:2142716
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) transcript_id : NM_018743.3

name	Gins4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801928 GeneID:109145 MGI:1923847
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GINS complex subunit 4 (Sld5 homolog) transcript_id : NM_024240.4

name	Golga7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109809746 GeneID:57437 MGI:1931029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 7 transcript_id : NM_001042484.1

name	Golga7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109809742 GeneID:57437 MGI:1931029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 7 transcript_id : NM_020585.2

name	Sfrp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301471 GeneID:20377 MGI:892014
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted frizzled-related sequence protein 1 transcript_id : NM_013834.2

name	LOC100040931 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258525 GeneID:100040931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100040931 transcript_id : XM_001475506.1

name	Zmat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130346 GeneID:320158 MGI:2443497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, matrin type 4 transcript_id : NM_177086.2

name	Nek3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754820 CCDS:CCDS22169.1 GeneID:23954 MGI:1344371
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : NIMA-related expressed kinase 3 product : NIMA (never in mitosis gene a)-related expressed kinase 3 protein_id : NP_035978.1

name	Ckap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138530 CCDS:CCDS22170.1 GeneID:80986 MGI:1931797
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cytoskeleton associated protein 2 protein_id : NP_001004140.1

name	Vps36 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794416 CCDS:CCDS22171.1 GeneID:70160 MGI:1917410
definition	GO_component : GO:0005770 - late endosome [Evidence IDA]; GO:0005764 - lysosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0043130 - ubiquitin binding [Evidence IDA] GO_process : GO:0016197 - endosome transport [Evidence IC]; GO:0015031 - protein transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : vacuolar protein sorting 36 protein_id : NP_081614.1

name	Thsd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9625041 CCDS:CCDS22172.1 GeneID:56229 MGI:1929096
definition	GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : transmembrane molecule with thrombospondin module product : thrombospondin, type I, domain 1 protein_id : NP_062522.1

name	Tpte (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40549440 CCDS:CCDS22173.1 GeneID:234129 MGI:2446460
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS] codon_start : 1 exception : mismatches in translation product : transmembrane phosphatase with tensin homology protein_id : NP_954866.1

name	Slc25a15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754952 CCDS:CCDS22175.1 GeneID:18408 MGI:1342274
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ornithine transporter, mitochondrial 1 product : solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein_id : NP_035147.1

name	Slc25a15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044465 CCDS:CCDS22175.1 GeneID:18408 MGI:1342274
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ornithine transporter, mitochondrial 1 product : solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein_id : NP_851842.1

name	Mrps31 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181116 CCDS:CCDS22176.1 GeneID:57312 MGI:1913153
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 note : islet mitochondrial antigen, 38 kD product : mitochondrial ribosomal protein S31 protein_id : NP_065585.1

name	AI316807 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60592996 GeneID:102032 MGI:2142501
definition	codon_start : 1 product : hypothetical protein LOC102032 protein_id : NP_001012685.1

name	Slc20a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794520 CCDS:CCDS22178.1 GeneID:20516 MGI:97851
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 20, member 2 protein_id : NP_035524.1

name	LOC100040803 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258524 GeneID:100040803
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475349.1

name	Vdac3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755967 CCDS:CCDS22179.1 GeneID:22335 MGI:106922
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005741 - mitochondrial outer membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA]; GO:0008308 - voltage-gated ion-selective channel activity [Evidence IEA] GO_process : GO:0006820 - anion transport [Evidence IEA]; GO:0001662 - behavioral fear response [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0007612 - learning [Evidence IMP]; GO:0007270 - nerve-nerve synaptic transmission [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : channel protein VDAC3; mitochondrial outer membrane protein product : voltage-dependent anion channel 3 protein_id : NP_035826.1

name	Dkk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704186 CCDS:CCDS22180.1 GeneID:234130 MGI:2385299
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : dickkopf homolog 4 protein_id : NP_663567.1

name	Polb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21729749 CCDS:CCDS22181.1 GeneID:18970 MGI:97740
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005874 - microtubule [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005876 - spindle microtubule [Evidence ISS]; GO:0000795 - synaptonemal complex [Evidence TAS] GO_function : GO:0003890 - beta DNA polymerase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006284 - base-excision repair [Evidence TAS]; GO:0006287 - base-excision repair, gap-filling [Evidence TAS] [Evidence IMP]; GO:0008219 - cell death [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 note : DNA polymerase beta; Pol beta product : polymerase (DNA directed), beta protein_id : NP_035260.1

name	Ikbkb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469101 CCDS:CCDS22182.1 GeneID:16150 MGI:1338071
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IDA] [Evidence IMP]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004702 - receptor signaling protein serine/threonine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0001782 - B cell homeostasis [Evidence IMP]; GO:0007252 - I-kappaB phosphorylation [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta product : inhibitor of kappaB kinase beta protein_id : NP_034676.1

name	Plat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679375 CCDS:CCDS22183.1 GeneID:18791 MGI:97610
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0030141 - secretory granule [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008243 - plasminogen activator activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IDA] GO_process : GO:0048008 - platelet-derived growth factor receptor signaling pathway [Evidence IDA] [Evidence IMP]; GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : plasminogen activator, tissue protein_id : NP_032898.1

name	Ap3m2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17505212 CCDS:CCDS22184.1 GeneID:64933 MGI:1929214
definition	GO_component : GO:0030662 - coated vesicle membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : adaptor-related protein complex 3, mu 2 subunit protein_id : NP_083781.1

name	Myst3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487239 GeneID:244349 MGI:2442415
definition	GO_component : GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0016407 - acetyltransferase activity [Evidence ISS]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004402 - histone acetyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0035162 - embryonic hemopoiesis [Evidence IMP]; GO:0016573 - histone acetylation [Evidence ISS]; GO:0030099 - myeloid cell differentiation [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0035019 - somatic stem cell maintenance [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : zinc finger protein 220 product : MYST histone acetyltransferase (monocytic leukemia) 3 protein_id : NP_001074618.1

name	LOC100042253 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258562 GeneID:100042253
definition	codon_start : 1 product : similar to Lsm6 protein protein_id : XP_001477816.1

name	Ank1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13624297 CCDS:CCDS22187.1 GeneID:11733 MGI:88024
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008093 - cytoskeletal adaptor activity [Evidence ISS]; GO:0019899 - enzyme binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA]; GO:0030507 - spectrin binding [Evidence ISS]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS] GO_process : GO:0045199 - maintenance of epithelial cell polarity [Evidence ISS]; GO:0015672 - monovalent inorganic cation transport [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : normoblastic anemia product : ankyrin 1, erythroid protein_id : NP_112435.1

name	Nkx6-3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51763993 GeneID:74561 MGI:1921811
definition	codon_start : 1 product : NK6 transcription factor related, locus 3 protein_id : XP_486090.1

name	Agpat6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520301 CCDS:CCDS22189.1 GeneID:102247 MGI:2142716
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003841 - 1-acylglycerol-3-phosphate O-acyltransferase activity [Evidence IEA]; GO:0008780 - acyl-[acyl-carrier protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence NAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046339 - diacylglycerol metabolism [Evidence IMP]; GO:0006631 - fatty acid metabolism [Evidence IMP]; GO:0002071 - glandular epithelial cell maturation [Evidence IMP]; GO:0007595 - lactation [Evidence IMP]; GO:0008610 - lipid biosynthesis [Evidence IMP]; GO:0030879 - mammary gland development [Evidence IMP]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0019432 - triacylglycerol biosynthesis [Evidence IMP]; GO:0006641 - triacylglycerol metabolism [Evidence IMP] codon_start : 1 note : testis spermatogenesis apoptosis-related protein 7; putative lysophosphatidic acid acyltransferase product : lysophosphatidic acid acyltransferase zeta protein_id : NP_061213.2

name	Gins4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195660 CCDS:CCDS22190.1 GeneID:109145 MGI:1923847
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : SLD5 protein_id : NP_077202.1

name	Golga7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109809747 GeneID:57437 MGI:1931029
definition	GO_component : GO:0000139 - Golgi membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006893 - Golgi to plasma membrane transport [Evidence ISS] codon_start : 1 product : golgi autoantigen, golgin subfamily a, 7 protein_id : NP_001035949.1

name	Golga7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109809743 GeneID:57437 MGI:1931029
definition	GO_component : GO:0000139 - Golgi membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006893 - Golgi to plasma membrane transport [Evidence ISS] codon_start : 1 product : golgi autoantigen, golgin subfamily a, 7 protein_id : NP_065610.2

name	Sfrp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301472 CCDS:CCDS22191.1 GeneID:20377 MGI:892014
definition	GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IGI]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : secreted frizzled-related sequence protein 1 protein_id : NP_038862.2

name	LOC100040931 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258526 GeneID:100040931
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475556.1

name	Zmat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893005 CCDS:CCDS22192.1 GeneID:320158 MGI:2443497
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : zinc finger, matrin type 4 protein_id : NP_796060.1

name	LOC547006 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547006
definition	number : 1 pseudo : _no_value

name	LOC547006 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547006
definition	number : 2 pseudo : _no_value

clone name	MSMg01-339J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349D17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-517G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-542J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-407K05.T7 (MSMg01no407_k05.b1)	MSMg01-407K05.TJ (MSMg01no407_k05.g1)
ACC	AG505550	AG505551
length	733	743
length of high quality (start - end)	516 (69 - 584)	603 (78 - 680)
definition	CHROMAT_FILE: MSMg01no407_k05.b1 PHD_FILE: MSMg01no407_k05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:23:20 2005	CHROMAT_FILE: MSMg01no407_k05.g1 PHD_FILE: MSMg01no407_k05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:23:20 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCCACTTGTTTCCATGGTTTGCACATCAAATCACGGTTGCTTTGACTG TCCCGACATTCTTGTCTGCTCATCTGCAGCAGTCTGTCTTCCCCCCCTTA TTACTGATTCAGCTTTCCTGCTTCTGGTTTCTGGTCATCTTTGGCTGCCA GACATCATGCATTTCACCTTTTTGGATGCTGGCTATTTTTGTAGCTTTGC ACTTGTCTGGCTGCTGTTCTGTTACAGCAGTTTGTTTGGGAAGCAGTCTG ATCCTACTGTGTTTTCCTTTCAGGGTTTCTTAGGCAGATCTTACGCATTG ATCAAGGTTGGGTTGATTATTTCCATTTCCTGGAGCATGATCCTTTTTTG CCCTTAGCTAATGTCTGCATGGTCAGGCTAGCCATTGCAAACAGCTGCTC AACGGTCAGTTGAAGTTTGTAGGAGACCTTCCAAGGGACTCTAGTGCTCT GACTCTCTGTCTCTTTCTCTTTGTTTTTGTTTTTTTGTTTGTTTTTCAAG CAGGGTTTCTCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGTCTGAGA CTCACAGAGATCTGCCTGTCCCTGCCTCTCAAGTGCTGGCATTAAAGGCA TGTGCCACTACCACCTCTACTTCATTCTGATTCTTGCTAAATGCCTTCTT CCTTGCTTTACATCTTCTGAACTATAGCTGCCT	GGCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCACAGTGACTGTTGTAATGTT TCCCTGTTTATTTCTAGTTCGTTTAACTTGGGGTATTTCTGTCTTTTGGT TAGTTGGGCCAAGAGTCTGTCAATTTTGTTTGACTTCTCAAAAACAAACA AACAAACAAACAAACAAACACAGCTCGTAGATCTGTTAATTCTTTGTACT GTTTTCTTTGTTTCTGCTTCATTGATTGAAGCTCTGGTTTTTCTTACTTC TTGCTGTTGGATGGATTTGGGTTTGGTTTGTTCCTGGTTTTCCAGTTTAT CAGTTGCATTCCTAACCCTCTTGTCTGTGCTTTTTCTTAAGTTCTACTGT AGGAGCTTCAAGCTATTAGTTCTCCTCACAGGACTGCTTCCCACATGTCT CAGACATTTTTGCGGTAATGTGTTCTCATTTTCATTTAGTTCCAGGAAGT TTTAGAAAATGCTGTCTTGATTTCTCCTTTGACCCATTCAGTGTTTCGTA ATGAGTTGTCTAATCTCCATGATCTTGCGTATTTACCAGAGGTGGTCAAT TTTAAGGTTAGTGCATTGTGATCTGATGGGATACAAGGAGTGATTTCAGC CTTTTTGAATTTATAAATATTTATTTTGTGTCCCAGGATGTGATCTGGTT TAGAAAAGCTTCCATATGCTGCTGAATAGAATGTATATGGTCT
quality values	Open. Hide. 8 8 8 8 8 10 9 16 30 28 37 37 32 29 31 37 22 23 20 19 21 26 34 59 27 27 28 28 25 21 21 9 9 9 15 12 9 9 11 10 10 10 23 27 31 47 47 43 29 23 22 28 37 37 30 33 21 21 16 18 13 13 11 11 11 9 9 13 16 19 28 34 37 37 37 36 36 38 38 42 42 47 48 48 48 50 48 59 57 59 59 59 59 57 68 57 57 48 48 48 59 59 59 59 54 54 54 53 53 50 57 57 57 54 54 54 57 54 47 47 47 47 57 57 57 57 57 57 57 68 68 48 48 43 44 44 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 50 50 50 50 50 57 57 57 59 59 59 59 57 57 54 59 59 59 52 50 43 50 59 59 57 57 57 52 52 57 57 57 57 57 57 59 59 59 59 59 57 57 57 57 52 52 57 57 57 57 59 57 57 57 57 57 59 57 57 57 57 57 57 59 59 59 59 59 52 52 57 57 57 57 59 59 68 68 68 68 68 68 57 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 52 52 52 62 62 62 52 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 43 31 43 43 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 52 52 52 52 52 62 39 39 15 17 17 19 39 39 43 26 43 43 52 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 52 52 52 52 52 52 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 62 59 59 57 57 57 57 57 57 44 44 52 52 52 38 38 52 52 45 57 57 57 44 43 29 22 18 22 22 29 43 43 52 43 43 52 52 52 52 57 57 57 52 52 52 52 52 52 52 52 52 52 57 57 57 52 52 52 52 52 43 44 35 32 32 35 35 44 44 52 52 50 50 43 30 28 14 14 24 27 19 14 24 24 43 32 43 28 29 27 43 28 37 35 42 42 44 44 42 24 24 11 11 16 34 34 57 57 57 57 57 57 57 57 57 57 57 57 48 57 57 57 48 48 47 47 28 28 13 13 18 28 32 36 25 24 29 29 29 36 23 29 17 17 16 26 24 32 36 42 40 43 40 39 39 32 32 39 30 30 39 39 48 37 43 43 37 34 32 34 37 25 23 11 11 11 16 23 37 37 39 41 41 34 24 12 12 8 8 8 10 9 8 9 10 15 13 13 12 12 12 18 23 12 14 16 23 12 11 11 16 15 13 11 11 11 11 11 13 18 18 28 19 21 21 24 17 22 28 23 23 13 10 7 7 7 10 10 8 10 12 19 15 13 11 11 11 18 19 16 18 14 16 10 10 10 10 23 13 11 11 11 12 11 11 10 10 10 13 13 10 10 10 13 20 28 27 24 13 14 14 12 12 16 18 20 13 14 17 10 10 8 9 9 9 11 13 24 13 12 12 22 21 24 16 19 18 24 15 11 10 10 11 11 8 8 8 8 11 8 8 8 8 8 8 8 6 8 8 8 10 6 9 9 15 11 8 8 8	Open. Hide. 6 6 8 8 8 9 10 9 9 9 13 14 27 25 20 18 19 23 23 24 39 39 39 41 41 37 37 37 37 26 30 28 23 16 11 9 9 15 11 20 21 30 30 33 32 43 36 36 39 37 37 47 39 37 37 39 41 41 28 22 16 18 10 10 10 12 21 19 43 47 47 28 29 35 35 30 35 39 39 39 39 39 39 47 47 44 44 42 42 43 43 43 54 43 43 43 43 40 48 48 57 47 57 43 43 41 43 43 68 68 68 68 68 68 57 57 57 57 57 59 57 59 59 68 68 59 59 47 57 43 59 44 47 47 57 57 57 50 57 57 47 47 47 57 57 59 57 50 57 57 68 68 68 68 68 68 57 57 48 52 57 57 57 57 57 57 57 57 57 54 54 54 57 57 68 68 68 68 57 57 57 57 57 57 57 57 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 59 59 57 57 43 44 43 57 57 43 43 57 52 52 62 62 62 62 62 62 62 62 62 52 52 62 62 62 52 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 45 52 52 62 62 52 62 52 62 62 62 62 62 62 62 62 62 43 43 43 43 44 45 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 52 52 62 62 62 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 43 62 43 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 43 44 47 57 57 57 52 52 57 57 57 57 57 52 52 57 57 57 57 57 68 68 68 68 68 68 68 59 57 57 57 52 52 52 57 57 57 57 68 68 68 59 59 57 52 43 50 50 50 52 57 59 59 59 57 52 54 57 57 57 57 54 54 54 57 44 59 59 52 52 52 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 34 34 43 43 43 44 42 43 43 57 46 46 57 57 57 57 57 57 48 48 48 57 57 57 57 54 57 57 57 57 57 57 59 47 43 43 43 43 59 42 39 30 31 41 31 31 33 42 42 48 48 48 48 48 48 48 59 48 48 48 43 43 36 36 43 43 43 48 48 47 32 32 32 46 46 59 59 59 41 37 37 21 16 12 14 14 25 25 20 20 20 30 34 59 59 59 41 39 31 30 25 30 30 34 28 25 25 31 31 37 37 39 43 43 34 34 36 32 32 34 34 37 33 37 30 19 14 14 14 15 16 21 32 30 30 30 37 37 40 41 39 39 35 31 34 39 43 44 47 59 33 32 27 25 23 29 39 41 41 41 36 36 36 37 37 37 44 27 26 11 11 10 10 8 8 8 8 11 11 15 19 15 15 15 22 24 26 22 15 15 11 12 12 25 23 11 11 14 21 21 22 20 19 20 18 14 15 21 24 33 39 32 27 19 15 15 24 23 18 11 11 11 11 12 13 15 10 11 11 21 23 15 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no407_k05.b1 MSMg01no407_k05.b1 CHROMAT_FILE:
MSMg01no407_k05.b1 PHD_FILE: MSMg01no407_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:20 2005
         (516 letters)



>mm_chr8_24238853_24239768
          Length = 916

 Score =  818 bits (423), Expect = 0.0
 Identities = 436/441 (98%), Gaps = 2/441 (0%)
 Strand = Plus / Minus

                                                                       
Query: 78  ccttattactgattcagctttcctgcttctggtttctggtcatctttggctgccagacat 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ccttattactgattcagctttcctgcttctggtttctggtcatctttggctgccagacat 857

                                                                       
Query: 138 catgcatttcacctttttggatgctggctatttttgtagctttgcacttgtctggctgct 197
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 856 catgcatttcacctttttggatgctggctatttttgtagctttgcacttgcctggctgct 797

                                                                       
Query: 198 gttctgttacagcagtttgtttgggaagcagtctgatcctactgtgttttcctttcaggg 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gttctgttacagcagtttgtttgggaagcagtctgatcctactgtgttttcctttcaggg 737

                                                                       
Query: 258 tttcttaggcagatcttacgcattgatcaaggttgggttgattatttccatttcctggag 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tttcttaggcagatcttacgcattgatcaaggttgggttgattatttccatttcctggag 677

                                                                       
Query: 318 catgatccttttttgcccttagctaatgtctgcatggtcaggctagccattgcaaacagc 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 catgatccttttttgcccttagctaatgtctgcatggtcaggctagccattgcaaacagc 617

                                                                       
Query: 378 tgctcaacggtcagttgaagtttgtaggagaccttccaagggactctagtgctctgactc 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 616 tgctcaacggtcagttgaagtttgtaggagaccttccaagggactctagtgttctgactc 557

                                                                       
Query: 438 tctgtctctttctctttgtttttg--tttttttgtttgtttttcaagcagggtttctctg 495
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 556 tctgtctctttctctttgtttttgtttttttttgtttgtttttcaagcagggtttctctg 497

                                
Query: 496 tcctggaactcactctgtaga 516
           |||||||||||||||| ||||
Sbjct: 496 tcctggaactcactctataga 476


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information