Query= MSMg01no408_l05.b1 MSMg01no408_l05.b1 CHROMAT_FILE:
MSMg01no408_l05.b1 PHD_FILE: MSMg01no408_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:45 2005
(419 letters)
>mm_chr8_124755430_124756249
Length = 820
Score = 746 bits (386), Expect = 0.0
Identities = 410/418 (98%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttccc-agatccattgggggttggcccagaagcccaggctgcacataagtttc 62
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaattcttcccaagatggattgggggttggcccagaagcccaggctgcacataagtttc 561
Query: 63 agtgtgtggcctggcctctgcttccaggctatgt-aggtacttagcaagggcatgcagag 121
||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||
Sbjct: 560 agtgtgtggcctggcctctgcttccaggccatgtca-gtacttagcaagggcacgcagag 502
Query: 122 aaagacccagggcttgcttcccaaagcaggtggcaggacacttcctggcttgcaatgcca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagacccagggcttgcttcccaaagcaggtggcaggacacttcctggcttgcaatgcca 442
Query: 182 agttgtaaaaggtacatgctccaaagacttggtggggagtgacataccactaacttctcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttgtaaaaggtacatgctccaaagacttggtggggagtgacataccactaacttctcc 382
Query: 242 aaggcaactgtggcaactccaggcttactgtgtcgcctgtcactccaggtgattgacagc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggcaactgtggcaactccaggcttactgtgtcgcctgtcactccaggtgattgacagc 322
Query: 302 taggggcttggactgaaacggatcctccagtagcggcaggacagaaggctcaggctgctg 361
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggggcttgggctgaaacggatcctccagtagcggcaggacagaaggctcaggctgctg 262
Query: 362 tgaaggagtgagaggccatcgctgggggcatacaagcagccactgacctgggtcggtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaggagtgagaggccatcgctgggggcatacaagcagccactgacctgggtcggtg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_l05.g1 MSMg01no408_l05.g1 CHROMAT_FILE:
MSMg01no408_l05.g1 PHD_FILE: MSMg01no408_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:45 2005
(388 letters)
>mm_chr8_124568810_124569599
Length = 790
Score = 712 bits (368), Expect = 0.0
Identities = 385/392 (98%), Gaps = 4/392 (1%)
Strand = Plus / Plus
Query: 1 caaaattgttccagggcaggaactgctcttctccatacccgagccccgagcagggttacc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaattgtcccagggcaggaactgctcttctccatacccgagccccgagcagggttacc 260
Query: 61 ctgagagtctcacacggctcctgcctccggccccatgacggctgtgtttgggatggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagagtctcacacggctcctgcctccggccccatgacggctgtgtttgggatggagag 320
Query: 121 ctgtcagtttctagcgctgttctcacggtagtacagaagccctcccacttacaggagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtcagtttctagcgctgttctcacggtagtacagaagccctcccacttacaggagcaa 380
Query: 181 caggcagcctgcttagaacctgcacagtagatgccttcctctgcgccttgagatctgcac 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 caggcagcctgcttagaacctgcacagtagatgccttcctctgggccttgagatctgcac 440
Query: 241 tggccaaggtgagggcctctgcttagagccacacctctctcagtgccagcttggagaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggccaaggtgagggcctctgcttagagccacacctctctcagtgccagcttggagaccc 500
Query: 301 cacaatagggtctctcactgcccgagttgccctcaa--ccctcactgaactggagcaggt 358
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 501 cacaatagggtctctcactgcccgagttgccctcaaagccctcactgagctggagcaggt 560
Query: 359 gtg--cgtgtgtgtgtgtgtgtgtgtgtgtgt 388
||| |||||||||||||||||||||||||||
Sbjct: 561 gtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgt 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 790
Length adjustment: 9
Effective length of query: 379
Effective length of database: 781
Effective search space: 295999
Effective search space used: 295999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
