Query= MSMg01no410_d05.b1 MSMg01no410_d05.b1 CHROMAT_FILE:
MSMg01no410_d05.b1 PHD_FILE: MSMg01no410_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:52 2005
(502 letters)
>mm_chr8_24697486_24698387
Length = 902
Score = 839 bits (434), Expect = 0.0
Identities = 485/502 (96%)
Strand = Plus / Plus
Query: 1 gaatggatggggctctttacccagctcctctatgccccagatttatttggaaagcaccaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gaatggatggggctctttacccagctcctctatgccccggatttatttggaaagcaccaa 260
Query: 61 ccaggaatattgcattccactgtcagatgggaacacaggacaaggtcctttgacacttgt 120
||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacgaatattccgttccactgtcagatgggaacacaggacaaggtcctttgacacttgt 320
Query: 121 agcttgagggcatgcagaggggtggcagttccaacttcagatgaaagcaggaaacacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcttgagggcatgcagaggggtggcagttccaacttcagatgaaagcaggaaacacagt 380
Query: 181 ggcagttctggaccgtttttctattgctgtggcaaagcttgtgataaaggaaggttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcagttctggaccgtttttctattgctgtggcaaagcttgtgataaaggaaggttggtt 440
Query: 241 tcatcttttttctttcggtccatcattcaggtaattcagggataaacacatggcctataa 300
||||||| | ||||| ||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 441 tcatcttatccctttcagtctatcattcaggtaattcagagataaacacatggcctatag 500
Query: 301 gacaaactcaactgccctcgtacggattcactattggaacttctctgtgcagataaatga 360
|||||| |||||||||| ||||| |||||| |||||||||||||||||||| ||||||||
Sbjct: 501 gacaaaatcaactgcccacgtacagattcattattggaacttctctgtgcaaataaatga 560
Query: 361 taccgtgaagagcctggcttctgccctttgggtgaaagcttgttcccactagctacctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccgtgaagagcctggcttctgccctttgggtgaaagcttgttcccactagctacctat 620
Query: 421 tatatttctgcatctgtgtcttcatttgcaatagggatcagtctaggaaatgctatgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 tatatttctgcatctgtgtcttcatttgcaatagggatcagtctaggaaatgctatgtca 680
Query: 481 tgttttgtgaggattaaagaca 502
||||||||||||||||||||||
Sbjct: 681 tgttttgtgaggattaaagaca 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_d05.g1 MSMg01no410_d05.g1 CHROMAT_FILE:
MSMg01no410_d05.g1 PHD_FILE: MSMg01no410_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:52 2005
(482 letters)
>mm_chr8_24865836_24866717
Length = 882
Score = 716 bits (370), Expect = 0.0
Identities = 382/386 (98%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 97 caaaggggtgggctactacctagtgattgttgtatatgtttaattattaggaaaaaacat 156
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 882 caaaggggtgggctactacctagtgattgttgtatatgtttaattattagg-aaaaacat 824
Query: 157 attaatacagaaatctttcctaaaatgaattctcttaggccttgcctcataagagcaaat 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 attaatacagaaatctttcctaaaatgaattctcttaggccttgcctcataagagcaaat 764
Query: 217 ctgttgcagattaatccaaagcagactatcttcggaagatcacctgctagttattagctt 276
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 763 ctgttgcagattaatccaaagcagactatctccggaagatcacctgctagttattagctt 704
Query: 277 atcctattatggctcctgacaaggtagaagagatgagagcatatgtttaaattcctataa 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 atcctattatggctcctgacaaggtagaagagatgagagcatatgtttaaattcctataa 644
Query: 337 ccaaataaaaggccagatgtggcaggtcatttctataagcctattcctatggtgatatgg 396
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 643 ccaaataaaaggccagatgtggcagatcatttctataagcctattcctatggtgatatgg 584
Query: 397 gagaggaaaaagtaaaatcctggaagttcaccagtcagctggccttgcatttgcagcata 456
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 583 gagaggaaaaagtaaaatcctggaagttcaccagtcagctggccttgcatttacagcata 524
Query: 457 ggaacagagaccaactgaaaagaata 482
||||||||||||||||||||||||||
Sbjct: 523 ggaacagagaccaactgaaaagaata 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
