Query= MSMg01no410_e15.b1 MSMg01no410_e15.b1 CHROMAT_FILE:
MSMg01no410_e15.b1 PHD_FILE: MSMg01no410_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:59 2005
(153 letters)
>mm_chr8_97713564_97714116
Length = 553
Score = 288 bits (149), Expect = 9e-83
Identities = 152/153 (99%)
Strand = Plus / Plus
Query: 1 ttctgagagaaaactactcaggcccagctgaccgcccctctcctggaggtgcagttgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctgagagaaaactactcaggcccagctgaccgcccctctcctggaggtgcagttgcaa 260
Query: 61 cctggactgtctgaaagactaacgtgcagacattttgctattgtggccttattaaactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 cctggactgtctgaaagactaacgtgcagacattttgctattgtggccttagtaaactct 320
Query: 121 agacgttcccataaccatctttgcctagcccag 153
|||||||||||||||||||||||||||||||||
Sbjct: 321 agacgttcccataaccatctttgcctagcccag 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_e15.g1 MSMg01no410_e15.g1 CHROMAT_FILE:
MSMg01no410_e15.g1 PHD_FILE: MSMg01no410_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:59 2005
(363 letters)
>mm_chr8_97865547_97866313
Length = 767
Score = 600 bits (310), Expect = e-176
Identities = 351/372 (94%), Gaps = 14/372 (3%)
Strand = Plus / Minus
Query: 1 tctaatcacccaacttgaatgctagtttgaccaggaaacagagggctaataagatcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tctaatcacccaacttgaatgctagtttgaccaggaaacagagggctaataagatcaggg 380
Query: 61 cagcattctctagaaccaagggaaagggcttttctattctttacttacaaggggagagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cagcattctctagaaccaagggaaagggcttttctattctttacttacaaggggagagga 320
Query: 121 tgaacagggtcaggctacccaaggtcattcccgtggcagctgctgaaactatatcttt-- 178
||||||| | ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 319 tgaacagagccaggctacccaaggtcattcccgtggcagctgctgaaacta-----ttaa 265
Query: 179 ----caaggaca---accaccaccagcacctgggcactggcccagtgatgagtgattaga 231
|||||||| |||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 264 acaacaaggacaaccaccaccaccagcgcctgggcactggcccagtgattagtgattaga 205
Query: 232 gcacgtgtgtaaccacgaggactggcattctgataccaggacccatctaacaagttgggc 291
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcacttgtgtaaccacgcggactggcattctgataccaggacccatctaacaagttgggc 145
Query: 292 atcctgtgtacacctgtcacctcagctataggtgggtcagagacaggattgctgaggctt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atcctgtgtacacctgtcacctcagctataggtgggtcagagacaggattgctgaggctt 85
Query: 352 gcaagcttccaa 363
||| ||||||||
Sbjct: 84 gcaggcttccaa 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 767
Length adjustment: 9
Effective length of query: 354
Effective length of database: 758
Effective search space: 268332
Effective search space used: 268332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
