Query= MSMg01no410_p02.b1 MSMg01no410_p02.b1 CHROMAT_FILE:
MSMg01no410_p02.b1 PHD_FILE: MSMg01no410_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:50 2005
(413 letters)
>mm_chr8_16845663_16846475
Length = 813
Score = 748 bits (387), Expect = 0.0
Identities = 404/410 (98%), Gaps = 1/410 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctctttctctgtattattctctcttattcacactgtgctctattatatctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattctctctctttctctgtattattctctcttattcacactgtgctctaatatatctc 264
Query: 65 atacttccatttactctctctcattctcttgctccctctacctttgctctattccttatc 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 atacttccatttactctctctcattctcttgctccctctacctctgctctattccttatc 324
Query: 125 ccttgctatttcaatctctccagtattttctttcaccctcccacttacctagctctggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccttgctatttcaatctctccagtattttctttcaccctcccacttacctagctctggtg 384
Query: 185 atgtccagtctacatctctctgctctggactcttccagaagcctctggctattccctctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgtccagtctacatctctctgctctggactcttccagaagcctctggctattccctctg 444
Query: 245 tcattgctacaatggaaacctttcctaacattggagcagtcatgccagtcatatctttac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcattgctacaatggaaacctttcctaacattggagcagtcatgccagtcatatctttac 504
Query: 305 catacaccctcacatgcatccagagcactggagggagggggggggg-tccctacngtact 363
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||
Sbjct: 505 catacaccctcacatgcatccagagcactggagggagggggggggggtccctacagcact 564
Query: 364 tgattctcagaacactgaattctccacactgagtccttcacaccattaag 413
|||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgattcacagaacactgaattctccacactgagtccttcacaccattaag 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_p02.g1 MSMg01no410_p02.g1 CHROMAT_FILE:
MSMg01no410_p02.g1 PHD_FILE: MSMg01no410_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:50 2005
(503 letters)
>mm_chr8_17056022_17056924
Length = 903
Score = 673 bits (348), Expect = 0.0
Identities = 366/372 (98%)
Strand = Plus / Minus
Query: 132 tttcttctatccatgtactcacgtttgtatggcatccattggagtgtcaaccacccagca 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tttcttctatccatgtactcacgtttgtatggcatccattggagtgtcaaccacccagca 838
Query: 192 gctgcacaggtaaataaaactgcctgaatttccctccactggaaactaccaactaccaat 251
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 837 gctgcacaggtaaataaaactgcctgaatttccctccattggaaactaccaactaccaat 778
Query: 252 agctcctgggctatgaacaaatggtggggaacctctgcaatactgggatgtggcctgact 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 agctcctgggctatgaacaaatggtggggaacctctgcaatactgggatgtggcctgact 718
Query: 312 tgattgtgtgtaggcagccatagatgctaagtcctatcctgtcacatccagagacattca 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgattgtgtgtaggcagccatagatgctaagtcctatcctgtcacatccagagacattca 658
Query: 372 ggccctcccaaccttcagctcttacagtttccccacccctcatgttcttaccaatattta 431
|||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct: 657 agccctcccaaccttcagctcttacagtttccctacccctcgtgttcttactaatattta 598
Query: 432 gtttgtatttctcatgaggtacattgttgaaatcattggtaacttgagtatcaatttttt 491
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 597 gtttgtatttctcatgaggtacattgttgaaatcatgggtaacttgagtatcaatttttt 538
Query: 492 ttctcttcatag 503
||||||||||||
Sbjct: 537 ttctcttcatag 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
