CCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTATGGTTTTCGTAGTTAATTGTACTGAAGGAGAACAAAAAAG
GAGAAAAGAACCCAAATGCATTAGTATTAGGCTAACCTCTCAACCATCTA
TGTCTAAATTGTACAGATAGCCATTGGTCTTACTATAGGATTAATGAGGC
TGATTCCATTTATAAATTTTCCTATGGATTGCTTAAGAAGATTAATTTAG
CTTTTCATTGGTATATCTCATATAGCTACTATGTGTGCATATCCCATACA
TCTCTGTGGAACTTTGGGTATAGTTTACCATTATATTTTGGCACAATTGT
AACAAGACTCTATACTTTGCAACTTTACAAAAGAGAAAAAAAAAAAAGAA
AAAAGAAAAAAAAGAAAAAAGGTAGCCGGGCAGTGGTGGCACACGCCTTT
AATCCCAGCACTTGGGAGGCAGAGACAGGCGGACTTCTGAGTTCAAGGCC
AGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAAGACTATACAGAGAAA
CCCTGTCTCGAAAAACCANNNNAAAAAAAAAAAATAAAAGAAAAGAATAG
AAAAGAAAAAAGGTGATAAATATTCAAATTTGAATCTAATAAGACTTTTG
ATGCCAGTTCTGTGATTGTCTGTCTTTTTCACTCTCTCCTTGCAGCATTT
ATTCATTTATTTATTCATTTATTTATTTATTGAGATACCTGGAAACAT

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGCTCAGAGCCTCCTCTTC
TTTGACTTGTATGTTTTTATTGCTATAAGGAGGAGAAGCTATCTTCCTTT
AAGGCTCACGTGGTTACATGGGAGCCTGCCTGCAGAGTGCAGCATAATCT
GTCCTTCTTAGGTCCTTAACCTTAATCACAATTCTTAGGTCTCCTTTATA
CAACTTTTTCTTTTGGCCAAGATCTAGGGTCAAGTCTTTGCATGTAAGGT
GGCATTTCCTGAGGTTTGGGGATTATGATTTAAATATCTTTGGGAGTCCT
TATTCTGCCTGCCACAGGAATGAAATGTCTTTTCTTTTGTCTCAGCTCCA
AGAAGGCTGTTACTTAAAAACATTCTATTAGTTTGGAAAGCTTCACAGAT
TGCTAAAATTTACTAAAGAAATTGTTACTGTAGGCTTTCAAAGTGACTTT
ACGTCAGTATATTGGTATCTTACAACTTAACATTAATTAGTTGTTTGTAC
ACTGACTTAATTATCCACTTTCCGGCTCAATTTAAGCAGAAAACTACATG
ACAAAACTGGATGAACACCGCCCACCAGATAAAACTCTGTCTTGGCCTCC
AAACTTTCTTGATGAAAGATTCACTTTCCTAATCAAAATACTCGCCATCC
CCCGTTGGGTGTCTTCCCGTTGCCCCCTTTTTTCCCGACGCTATTTTCCC
TTTCC

Query= MSMg01no412_b12.b1 MSMg01no412_b12.b1 CHROMAT_FILE:
MSMg01no412_b12.b1 PHD_FILE: MSMg01no412_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:21 2005
         (515 letters)



>mm_chr8_32935079_32935993
          Length = 915

 Score =  971 bits (502), Expect = 0.0
 Identities = 508/512 (99%), Gaps = 4/512 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaattgtactgaaggagaacaaaaaaggagaaaagaacccaaatgcattagtattaggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaattgtactgaaggagaacaaaaaaggagaaaagaacccaaatgcattagtattaggc 260

                                                                       
Query: 61  taacctctcaaccatctatgtctaaattgtacagatagccattggtcttactataggatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacctctcaaccatctatgtctaaattgtacagatagccattggtcttactataggatt 320

                                                                       
Query: 121 aatgaggctgattccatttataaattttcctatggattgcttaagaagattaatttagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaggctgattccatttataaattttcctatggattgcttaagaagattaatttagct 380

                                                                       
Query: 181 tttcattggtatatctcatatagctactatgtgtgcatatcccatacatctctgtggaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcattggtatatctcatatagctactatgtgtgcatatcccatacatctctgtggaac 440

                                                                       
Query: 241 tttgggtatagtttaccattatattttggcacaattgtaacaagactctatactttgcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgggtatagtttaccattatattttggcacaattgtaacaagactctatactttgcaa 500

                                                                       
Query: 301 ctttacaaaagagaaaaaaaaaaaagaaaaaagaaaaaaaagaaaaaaggtagccgggca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttacaaaagagaaaaaaaaaaaagaaaaaagaaaaaaaagaaaaaaggtagccgggca 560

                                                                       
Query: 361 gtggtggcacacgcctttaatcccagcacttgggaggcagagacaggcggacttctgagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggtggcacacgcctttaatcccagcacttgggaggcagagacaggcggacttctgagt 620

                                                                       
Query: 421 tcaaggccagcctggtctacaaagtgagttccaggacagccaagactatacagagaaacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaaggccagcctggtctacaaagtgagttccaggacagccaagactatacagagaaacc 680

                                           
Query: 481 ctgtctcgaaaaaccannnnaaaaaaaaaaaa 512
           ||||||||||||||||    ||||||||||||
Sbjct: 681 ctgtctcgaaaaacca----aaaaaaaaaaaa 708


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space:   457025
Effective search space used:   457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)