Query= MSMg01no412_o08.b1 MSMg01no412_o08.b1 CHROMAT_FILE:
MSMg01no412_o08.b1 PHD_FILE: MSMg01no412_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:24 2005
(481 letters)
>mm_chr8_101826373_101827252
Length = 880
Score = 820 bits (424), Expect = 0.0
Identities = 463/482 (96%), Gaps = 11/482 (2%)
Strand = Plus / Minus
Query: 5 gaattcttggatattccactcattattaaatttcccccacatgaaggtgtttggaaaagg 64
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaattcttggatatgcaagtcattattaaatttcccccacatgaaggtgtttggaaaagg 621
Query: 65 gaggtgaatagatctgttctatgctatgtatttgacatattttgttttattaatacaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaggtgaatagatctgttctatgctatgtatttgacatattttgttttattaatacaaag 561
Query: 125 ctttaaagcaagattggtttattgtaaaacttgaatggcttacctatgcttatgcattga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctttaaagcaagattggtttattgtaaaacttgaatggcttacctatgcttatgcattga 501
Query: 185 aaatctggactcagatattgtaaatccaccagtttcctttccctctaatcactgttatga 244
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 500 aaatctggactcagatattataaatccaacagtttcctttccctctaatcactgttatga 441
Query: 245 ttaagaaaaatgatgatcagtgactctgatg-----tttttttgttccagaagtgctctt 299
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 ttaagaaaaatgatgatcagtgactctgatgccaaa------tgttccagaagtgctctt 387
Query: 300 tattaacaaacaccctggaatatcttcatattggtagaaaggacaagttatttggaaagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tattaacaaacaccctggaatatcttcatattggtagaaaggacaagttatttggaaagg 327
Query: 360 aaagtccaagtcataagttttaagactctttttagacatgagtgaatcagtgctctctca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 326 aaagtccaagtcataagttttaagactctttttagacatgagtgaatcagtgctctctta 267
Query: 420 cagaccaacatcagcattctaagaaatgatcatatgaaacaacacatcataatgttttat 479
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 266 cagaccaacatcagcattctaagaaattatcatatgaaacaacacatcagaatgttttat 207
Query: 480 aa 481
||
Sbjct: 206 aa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 880
Length adjustment: 10
Effective length of query: 471
Effective length of database: 870
Effective search space: 409770
Effective search space used: 409770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_o08.g1 MSMg01no412_o08.g1 CHROMAT_FILE:
MSMg01no412_o08.g1 PHD_FILE: MSMg01no412_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:25 2005
(405 letters)
>mm_chr8_101654656_101655458
Length = 803
Score = 710 bits (367), Expect = 0.0
Identities = 380/385 (98%), Gaps = 2/385 (0%)
Strand = Plus / Plus
Query: 21 tagctatactctctttctcctacaagtagtttggctattatttactatatgtctttctac 80
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 221 tagctatactctctttctcctataagtagtttggctattatttactatatgtctttctac 280
Query: 81 gattttcctctaaccaacttttttgtatatctctgattggtagagatgtgaccccccaca 140
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 281 gattttcctctaaccaacttttttgtacatctctgattggtagagatgtgaccccccaca 340
Query: 141 attcactaccaattataaagccctcaaattgaatgcagccagtgagttcactgcatgatt 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 attcactaccaattataaagccctcaaattgaatgcagccagtgagttcactgcatgatt 400
Query: 201 tctcatccctgatattcatattaacctttaattaactgcctgaatgcatcttagaatttt 260
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 401 tctcatccctgatattcatattaacctttaattaactgcctgaatgcagcttagaatttt 460
Query: 261 ataatttcaaatattgcctatgcaggtacttttttttttcagaactatatgagaatagaa 320
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 461 ataatttcaaatattgcctatgcaggtactttttttt--cagaactatatgagaatagaa 518
Query: 321 ggaaaatcccatagcttttaatttctttcacataaaccttcattaaaatttcttctcagg 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaaaatcccatagcttttaatttctttcacataaaccttcattaaaatttcttctcagg 578
Query: 381 aaactgttggaatttgttcaacact 405
|||||||||||||||||||||||||
Sbjct: 579 aaactgttggaatttgttcaacact 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 803
Length adjustment: 9
Effective length of query: 396
Effective length of database: 794
Effective search space: 314424
Effective search space used: 314424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
