XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTCTTT
TTACAGCTGAGTAGTATTCCATTGTGTAAATGTACCACATTTTAGCTATC
CATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTAT
AAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACTGGTTG
GGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCGGGATCCTCCGGT
AGTACTATGTCCAATTTTCTGAGTAACCACCAGACTGATTTCCAGAGTGG
TTGTACTATCTTGCAATCCCACTTTTTCATTATCTACCTTTGAAGTTCAG
CACTCAGCTTTTAGTCTTCCATGAAAATAGACACTATACTTGGTTTTGGA
CTTCTTTTTAACATTTTGTTCATATTACCTCTAAATACTTTTGCTTATCA
GGAACTTTGTGATAATCATAAGTATGTAGAGTCAACCTTTTCCTAGTAAT
ACATAGATTGTCTGTGCACACATGAATACATTACATATGTGTGGTTTTTG
CTTATAATCAGTCATGGGTAGGCAATATTTGTTACATTAGTGTTATTTTT
TCTTTTTAAGTACATTTTATGCATTTGTGAATATCAGTTTATTTTCATTT
GATAAATGAAAAGAATTTACTTTCAATTGTTATGGCTGTTCTTTCTTATA
AGAAAACTTCCTGAGTGGCAATGGCAGGAGA

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXAGAAAATTCAGGCCAAGAAGTGGGAGTAGGGGGGGGAGTGGGGGGG
NTATTTCCCCCTCTTCCCCTTCCCTTTCCTGTCTTTGTTCTCCCTTTTTT
TCTGCGGGGGGGGTTGTCTCCCGCCCTTCCTCCTTCCTTGCTTCCGCCCT
TTTCCTTCCGTCTGTCCTCTTCTCCGTCCTCTTTTTTTTTTTCCCCCTGC
TCGCGCCCCCCCCCTCTTCCTTCTTCGCCCCCCTCCCGCTCCCCCCCTTT
TCCGTGCCTTTTGCCCCCCCGCCGCCNCCCCCCGCGCTCTTTTTTTTTTC
CCCCCCTTTGCCCGATTCCCCCTTCCCCTTTTCCGTTTTTTTTCTCCCCC
TCCTCCATTTTCTGTTCCCGCCCCTTCTTCTTTTCTTTCTTTCCTCCTCC
TTCTCCCTTCTTCCCCTTCTCCCTATTCCCTCTTCTCTTTTCTCCCCCTT
CTTCCTTCCCCTCTTTTTCCTCTTCCCCTTCTCTCTTTTTTTTTCCTCAT
CCTCTTCCCCTCTCTTCTCATCCCTCAACATTAACCCTTTTCAATTTTAA
CTCTAACCCTATACTCATTTACCCTATCCTTGCCAATCTCTATTTTTTTC
TACCTCAACACACTCTTACACCTTTTTCTTCCTACCTCCATTCTTCTTTT
CCCTTTACTACCCTTCTTACCACTTACTCCCCTATCATCTCCCCCTACCA
ACCTN

Query= MSMg01no413_n16.b1 MSMg01no413_n16.b1 CHROMAT_FILE:
MSMg01no413_n16.b1 PHD_FILE: MSMg01no413_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:40 2005
         (640 letters)



>mm_chr8_66746643_66747682
          Length = 1040

 Score = 1035 bits (535), Expect = 0.0
 Identities = 547/551 (99%)
 Strand = Plus / Minus

                                                                        
Query: 90   tgggttctttccagcttctggctattataaataaggctgctatgaacatagtggagcatg 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tgggttctttccagcttctggctattataaataaggctgctatgaacatagtggagcatg 981

                                                                        
Query: 150  tgtccttcttactggttgggacatcttctggatatatgcccaggagaggtattgcgggat 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 980  tgtccttcttactggttgggacatcttctggatatatgcccaggagaggtattgcaggat 921

                                                                        
Query: 210  cctccggtagtactatgtccaattttctgagtaaccaccagactgatttccagagtggtt 269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920  cctccggtagtactatgtccaattttctgagtaaccaccagactgatttccagagtggtt 861

                                                                        
Query: 270  gtactatcttgcaatcccactttttcattatctacctttgaagttcagcactcagctttt 329
            |||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 860  gtacaagcttgcaatcccactttttcattatctacctttgaagttcagcactcatctttt 801

                                                                        
Query: 330  agtcttccatgaaaatagacactatacttggttttggacttctttttaacattttgttca 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  agtcttccatgaaaatagacactatacttggttttggacttctttttaacattttgttca 741

                                                                        
Query: 390  tattacctctaaatacttttgcttatcaggaactttgtgataatcataagtatgtagagt 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740  tattacctctaaatacttttgcttatcaggaactttgtgataatcataagtatgtagagt 681

                                                                        
Query: 450  caaccttttcctagtaatacatagattgtctgtgcacacatgaatacattacatatgtgt 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680  caaccttttcctagtaatacatagattgtctgtgcacacatgaatacattacatatgtgt 621

                                                                        
Query: 510  ggtttttgcttataatcagtcatgggtaggcaatatttgttacattagtgttattttttc 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620  ggtttttgcttataatcagtcatgggtaggcaatatttgttacattagtgttattttttc 561

                                                                        
Query: 570  tttttaagtacattttatgcatttgtgaatatcagtttattttcatttgataaatgaaaa 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560  tttttaagtacattttatgcatttgtgaatatcagtttattttcatttgataaatgaaaa 501

                       
Query: 630  gaatttacttt 640
            |||||||||||
Sbjct: 500  gaatttacttt 490


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)