Query= MSMg01no415_e09.b1 MSMg01no415_e09.b1 CHROMAT_FILE:
MSMg01no415_e09.b1 PHD_FILE: MSMg01no415_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:36 2005
(239 letters)
>mm_chr8_54584649_54585287
Length = 639
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%)
Strand = Plus / Minus
Query: 1 aatgagtctagctcaggctctttgacattattgttcatgccaccatcatcaacaccattg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 438 aatgagtctagctcaggctctttgacattattgttaatgccaccatcatcaacaccattg 379
Query: 61 tactcatcacaattggagacatcatcaccttcatcaacaaccatatctatagcagcagga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 378 tactcatcacaattggagacatcatcaccttcatcaacaaccatatctatagcatcagga 319
Query: 121 acaatggataaattagccatcatacccacagctacaataacaaataaaccaagatgaaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 318 acaatggataaattagccatcatacccacagctacaataacaaataaaccaagaggaaag 259
Query: 181 tatattggtgacttaccctaccacactttggatggattccaaccagggcactgggacc 238
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 258 tatattggtgacttaccctatcacactttggatggattccaaccagggtactgggacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_e09.g1 MSMg01no415_e09.g1 CHROMAT_FILE:
MSMg01no415_e09.g1 PHD_FILE: MSMg01no415_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:36 2005
(357 letters)
>mm_chr8_54407536_54408291
Length = 756
Score = 630 bits (326), Expect = 0.0
Identities = 347/354 (98%), Gaps = 1/354 (0%)
Strand = Plus / Plus
Query: 2 cacaatttataaatgtgagacattcaatttttacagtgaagttcaacgaagaatagctgc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cacaatttataaatgtgagacattcaatttttacagtgaagttcaacgaagaatagctgc 261
Query: 62 aagtatttcttttgtcaatcagtacaatagactcactcattgtgacctggtcacttacat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagtatttcttttgtcaatcagtacaatagactcactcattgtgacctggtcacttacat 321
Query: 122 ttattctttatccactgcactacaaactaagtttaaactaagcttcttggttaatctata 181
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 ttattctttat-cactgcactacaaactaagtttaagctaagcttcttggttaatctata 380
Query: 182 gtcttcttaacttccctgtattcaattagttaaagcattctaacatcaaaagagttaagg 241
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 gtcttcttaacttccctatattcaattagttaaagcattctaacatcaaaagacttaagg 440
Query: 242 taatatagccagtgtctactctcgtcataaatccatactccagactaaataacatttctc 301
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatctagccagtgtctactctcgtcataaatccatactccagactaaataacatttctc 500
Query: 302 tatataatgttacaattaaatattatatatgtgataacatgatagtatatatcc 355
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 501 tatataatgttacaatcaaatattatatatgtgataatatgatagtatatatcc 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 756
Length adjustment: 9
Effective length of query: 348
Effective length of database: 747
Effective search space: 259956
Effective search space used: 259956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
