Query= MSMg01no416_j24.b1 MSMg01no416_j24.b1 CHROMAT_FILE:
MSMg01no416_j24.b1 PHD_FILE: MSMg01no416_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:18 2005
(555 letters)
>mm_chr8_35332929_35333884
Length = 956
Score = 1048 bits (542), Expect = 0.0
Identities = 551/556 (99%), Gaps = 5/556 (0%)
Strand = Plus / Minus
Query: 3 ggaattctccatgc---tttcacagaggcggacagagaagggacggatcactaggcagag 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggaattctccatgcaaa--tcacagaggcggacagagaagggacggatcactaggcagag 699
Query: 60 atatgacacagaataaaatgaaaaggacagacacgcatctaaaagaaatccgccaccggg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atatgacacagaataaaatgaaaaggacagacacgcatctaaaagaaatccgccaccggg 639
Query: 120 atgaaaatctgagggcttttggcaactcagatatagaaagcttgagctttaagtggcttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 atgaaaatctgagggcttttggcaactcagatatagaaagcttgagctttaagtggcttg 579
Query: 180 tggtggcacatctaccgttcagacgcctctgctctgatcgagggtcagtctactctccag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tggtggcacatctaccgttcagacgcctctgctctgatcgagggtcagtctactctccag 519
Query: 240 gcttgggttccttaccagctccaacctgcgcacctccagataacactcaactcacccgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gcttgggttccttaccagctccaacctgcgcacctccagataacactcaactcacccgca 459
Query: 300 gcaatgaaggcttcacacttgcttgtaaagatctccaactgaagcagacatccccaaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gcaatgaaggcttcacacttgcttgtaaagatctccaactgaagcagacatccccaaaga 399
Query: 360 ggaagtcgtatcttatattcctgccactatctggtactacttcatcgaaatcagacttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggaagtcgtatcttatattcctgccactatctggtactacttcatcgaaatcagacttta 339
Query: 420 aaatttatacagaacagaactaaaggtgaaaagcctctgttttaagctttcagacaataa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aaatttatacagaacagaactaaaggtgaaaagcctctgttttaagctttcagacaataa 279
Query: 480 tattctatttttataaaggcatcattcttaaagcactggagattgaactcctggccccac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tattctatttttataaaggcatcattcttaaagcactggagattgaactcctggccccac 219
Query: 540 ccatgctaagcgaagg 555
||||||||||||||||
Sbjct: 218 ccatgctaagcgaagg 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space: 515570
Effective search space used: 515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_j24.g1 MSMg01no416_j24.g1 CHROMAT_FILE:
MSMg01no416_j24.g1 PHD_FILE: MSMg01no416_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:18 2005
(528 letters)
>mm_chr8_35154531_35155458
Length = 928
Score = 1013 bits (524), Expect = 0.0
Identities = 527/528 (99%)
Strand = Plus / Plus
Query: 1 tagaccagaagggactacactaaacctgagaatggaaaagtggagtaatctagaaagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaccagaagggactacactaaacctgagaatggaaaagtggagtaatctagaaagaac 260
Query: 61 tggttttaatttatgattaaaacaatggttaagaaaggtcaagtatgaaatgtcttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttttaatttatgattaaaacaatggttaagaaaggtcaagtatgaaatgtcttgaaa 320
Query: 121 atattttctttgaagggagaggaacaggaagcttaagaaatctatactgagtactgagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattttctttgaagggagaggaacaggaagcttaagaaatctatactgagtactgagta 380
Query: 181 ctgagtatgccaagacacgagctttaaaccccagtgtgagagcctcatgtctagggagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagtatgccaagacacgagctttaaaccccagtgtgagagcctcatgtctagggagtc 440
Query: 241 cagcgcctgatcctccatctcctagtctagcattagcctccatctgagtgagtaggaagg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcgcctgagcctccatctcctagtctagcattagcctccatctgagtgagtaggaagg 500
Query: 301 ggtgatgctcgtaagcctgataaatacctaagcatctctcctttcctcctaagctgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgatgctcgtaagcctgataaatacctaagcatctctcctttcctcctaagctgtctt 560
Query: 361 tataatcaagccatggcactttcataaacgacgctaggaacccacgggacgtttggaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tataatcaagccatggcactttcataaacgacgctaggaacccacgggacgtttggaggg 620
Query: 421 ccgcgcctcatccccgacttatatttggaagcgagtcaaggaattaacatttcggtgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccgcgcctcatccccgacttatatttggaagcgagtcaaggaattaacatttcggtgtga 680
Query: 481 gggtcaatggtgcacggaaaaacaactccaggtcctcctcctcctcca 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggtcaatggtgcacggaaaaacaactccaggtcctcctcctcctcca 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
