XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTCA
TCCATTTACCATTTGCCTATACCACATTTTTCTCATATATTTTTCTGAGT
GGGTTTTGCTTAAAACAGACCTCTGAAATGCATCAGCTGAACGGAAATCA
TTCAAAGCGATTTTTATCTCTAACAGCTAGGAATAAAGTTAAAATTTTAA
GGGTTTATATAAAATCTCTACATAAAATTTCCCTAAAGCCTCTGCATTCA
TAAAATGCTTATTAATTTTTGTTGACTCAGGAACCTTATCATTTTCAATG
ATTCCGCTCAGCTATAATAATGTTGTGCCTTAGGCAGCATTTCCCCAGTG
GATGCTGAAGATAACCAATGAAGTGTTTCTAGAATTATTACATTCCGACT
TTCCATAGTGTTTCCAATGAACTTCAGCAACACCCCCCCCACACACACAC
ACACATTTTTTTCTCTATGATTTTGGGAAGGCATTACTTAGCTGTGTGAC
TTCTGGTAAAAATCAAACTTTGTCCTTCATACTAAGAAAACGTCTCTCAC
CACAGAGGGAGATCATCCCAGAAAATCCCAACCAACCAAAATGTTTCTTA
CTCCTTATAAATCTAAGACCAAATGCATTTTTAAACAGTTACTGACTTGA
TTGTTCTTTCAATAATCTCCTGAATTATCGCAAAATATCCATTTTCCTCC
TATTTTAATTAACAATATTTTTTCCCAGAGCTTTTCCTATCN

GGGGTGGGGTGGGGAGGCCGACGTGACAAGATCTCAAGAAATAAAATAAT
TATAAATAAAATAGCCTGCTTTACCCATTAGTACTCAACATGTTCAGGAG
AAGGCATGAGTAAGTTCATAGAGCATCATAATCACCAAGTGTAGAAATAT
CAAACCTCGTTTCGCCCAGCATATGCGTCAAACTGCCACCCCTTATCCCT
TTATAGTAGAGGATCCGCGCACAGTGCGAAACGTCCACACATTAAAATCT
TATACCTTTACACTGATAACAAGAAAAAATGATAAAAAAAAAAGAAGAAA
AGGAAAGATCAAAAAAGAAAAAAGAAGAAAAAAAACAGAAAAAGGAAAGA
GTGAAAAAACAGAATTAATAATTATTAATTCAAAATATAAAAGTATCGCA
GCCCGGGCCGGGAGCGGTCGGGTGGGCGTCGGACAAGAAGTATGATTACT
TATGAAAAGAAAACGATCAGAAAACCACTAATTATGTCCAACAAACTAAT
AAACAAAACTAGATCGATCGTACGATAATATAATACATAAAATCGTTTAG
AGGCGTTGGCCGGGGGGCGGTGGTCCCCCTTGTAAAAAATTCTCCCAGGG
TTTAAGTTTCAGCGGGGGTGCCNGAACCCCCCCCCCCCCCCTTTTTATTA
AAAAAAAAAACACAATCCGGCCCTTGTTATTGTCAAGGGAGCACAATATT
AAGAACAACCACAAAACACCTATGTTCTTTTTTATGGAGAAAAAAGAGAG
GGAGAGTTAAGGGGAGATTAGTCGTGGAAAACCACCCCCCCCCCCATTAT
TTATTTTTGATATTTAGGAAAAAAAAAAACAACNCATCAACACAAACCCC
CACGACAAAGTGGGTATTTAATAATTTTAAATAAATATAACTATCCCCAC
AAGATACAAAGTCCCACGTAGGGTTTATTATAATATTAATACACCAGCGG
CTGA

Query= MSMg01no416_l06.b1 MSMg01no416_l06.b1 CHROMAT_FILE:
MSMg01no416_l06.b1 PHD_FILE: MSMg01no416_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:23 2005
         (602 letters)



>mm_chr8_104116639_104117648
          Length = 1010

 Score = 1075 bits (556), Expect = 0.0
 Identities = 591/606 (97%), Gaps = 8/606 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcatccatttaccatttgcctataccacatttttctcatatatttttctgag 64
           ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattctttcatccaattatcatttgcctataccacatttttctcatatttttttctgag 264

                                                                       
Query: 65  tgggttttgcttaaaacagacctctgaaatgcatcagctgaacggaaatcattcaaagcg 124
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 tgggttttgcttaaaacagacctctgaaatgcatcagctgaatggaaatcattcaaagcg 324

                                                                       
Query: 125 atttttatctctaacagctaggaataaagttaaaattttaagggtttatataaaatctct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttttatctctaacagctaggaataaagttaaaattttaagggtttatataaaatctct 384

                                                                       
Query: 185 acataaaatttccctaaagcctctgcattcataaaatgcttattaatttttgttgactca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acataaaatttccctaaagcctctgcattcataaaatgcttattaatttttgttgactca 444

                                                                       
Query: 245 ggaaccttatcattttcaatgattccgctcagctataataatgttgtgccttaggcagca 304
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 ggaaccttatcattttcaatgattccgctcagctataataaagttgtgccttaggcagca 504

                                                                       
Query: 305 tttccccagtggatgctgaagataaccaatgaagtgtttctagaattattacattccgac 364
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 tttccccagtggatgctgaagataaccaatgaagtgtttctagaatgattacattccgac 564

                                                                       
Query: 365 tttccatagtgtttccaatgaacttcagcaacacccccccc---acacacacacacaca- 420
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| 
Sbjct: 565 tttccatagtgtttccaatgaacttcagcaacacccccccccccacacacacacacacac 624

                                                                       
Query: 421 --tttttttctctatgattttgggaaggcattacttagctgtgtgacttctggtaaaaat 478
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gttttttttctctatgattttgggaaggcattacttagctgtgtgacttctggtaaaaat 684

                                                                       
Query: 479 caaactttgtccttcatactaagaaaacgtctctc--accacagagggagatcatcccag 536
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 685 caaactttgtccttcatactaagaaaacgtctctctcaccacagagggagatcatcccag 744

                                                                       
Query: 537 aaaatcccaaccaaccaaaatgtttcttactccttataaatctaagaccaaatgcatttt 596
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 aaaatcccaaccaaccaaaatgtttcttactccttaaaaatctaagaccaaatgcatttt 804

                 
Query: 597 taaaca 602
           ||||||
Sbjct: 805 taaaca 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1010
Length adjustment: 10
Effective length of query: 592
Effective length of database: 1000
Effective search space:   592000
Effective search space used:   592000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)