Query= MSMg01no418_c18.b1 MSMg01no418_c18.b1 CHROMAT_FILE:
MSMg01no418_c18.b1 PHD_FILE: MSMg01no418_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:18 2005
(486 letters)
>mm_chr8_14684785_14685670
Length = 886
Score = 837 bits (433), Expect = 0.0
Identities = 468/480 (97%)
Strand = Plus / Plus
Query: 7 gaattctgtatgttttcgagtgagtttcttcaattgtgtgtggcttccanacatggattt 66
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 207 gaattctgtatgtaatcgagtgagtttcttcaattgtgtgtggcttccaaacatggattt 266
Query: 67 taactagcattgctgaagaagagagattctgtttaaacctgaggtcaccctgtgaagtca 126
|||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 267 taactagcgttgttgaagaggagagattctgtttaaacctgcggtcaccctgtgaggtca 326
Query: 127 cccctatgccctgtgatgtgaaggtctggaaaggcaaagtcacctatgcgcatgctgttg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cccctatgccctgtgatgtgaaggtctggaaaggcaaagtcacctatgcgcatgctgttg 386
Query: 187 tgcaggatccgaatcctcaaaacagcatccttctcacattccactaagtgcctgcacata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgcaggatccgaatcctcaaaacagcatccttctcacattccactaagtgcctgcacata 446
Query: 247 cacacagcacagtccagttcatatatgtgtagtgtatacccgagagttaaatgctgtgaa 306
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 447 cacacagcacagtccagttcaaatatgtgtagtggatacccgagagttaaatgctgtgaa 506
Query: 307 ccaactgtctgtggagaaggctggacacgtgttacagcctcatcagaagagaaccccgcc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccaactgtctgtggagaaggctggacacgtgttacagcctcatcagaagagaaccccgcc 566
Query: 367 cctcccctccatttctaggatgcactagattccatgaaataagaaacgtgggactattag 426
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 567 cctcccctccatttctaggatgcactagattccatgaaataagaaacatgggactattag 626
Query: 427 tgtctccattacatgatatctttacattggaatttcagggacacaaagagatggcttagc 486
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 627 tgtctccattacatgatatctttacattggaattccagggacacaaagagatggcttagc 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_c18.g1 MSMg01no418_c18.g1 CHROMAT_FILE:
MSMg01no418_c18.g1 PHD_FILE: MSMg01no418_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:18 2005
(456 letters)
>mm_chr8_14858417_14859270
Length = 854
Score = 820 bits (424), Expect = 0.0
Identities = 448/460 (97%), Gaps = 10/460 (2%)
Strand = Plus / Minus
Query: 1 cagccagggctacacagagaaaccctgtcttgcaccctgcccctctcaataaaaaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 686 cagccagggctacacagagaaaccctgtcttgcaccctgcccctcccaataaaaaaggaa 627
Query: 61 gaaagaaacttgtttctgagttgctggccactcataaatcttccttacacagatgtcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaaagaaacttgtttctgagttgctggccactcataaatcttccttacacagatgtcttg 567
Query: 121 gtgttagtttcttaattccaatgaagagttcctgtgttatttcttcatgattctatttct 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 566 gtgttagtttcttaattccaatgaagagttcctgcgttatttcttcatgattctatttct 507
Query: 181 tcacgtgggaaagcccagcccagcacctaagaatgagctgggggaagaatgaacctcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcacgtgggaaagcccagcccagcacctaagaatgagctgggggaagaatgaacctcaaa 447
Query: 241 tcc--ttttttcctgcctcatctctgagagcttccatggatcatgctgtagacagaactg 298
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tccagttt---cctgcctcatctctgagagcttccatggatcatgctgtagacagaactg 390
Query: 299 aactaaggatattaacacaagcagttgctagtgcggctcatggatataaagcctttagaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aactaaggatattaacacaagcagttgctagtgcggctcatggatataaagcctttagaa 330
Query: 359 aattctggagtgtccagaatatctcatgcaattacatcttcagaaatatatttattaatt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aattctggagtgtccagaatatctcatgcaattacatcttcagaaatatatttattaatt 270
Query: 419 ccaggaaaaaaaaaacaagtaccaaaaaaa--gaaaaaag 456
|||||||||||| ||||||||||||||| ||||||||
Sbjct: 269 ccaggaaaaaaa---caagtaccaaaaaaaaagaaaaaag 233
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 854
Length adjustment: 10
Effective length of query: 446
Effective length of database: 844
Effective search space: 376424
Effective search space used: 376424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
