Query= MSMg01no418_i09.b1 MSMg01no418_i09.b1 CHROMAT_FILE:
MSMg01no418_i09.b1 PHD_FILE: MSMg01no418_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:45 2005
(273 letters)
>mm_chr8_116487131_116487803
Length = 673
Score = 499 bits (258), Expect = e-146
Identities = 267/270 (98%), Gaps = 2/270 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttgcttgg-catccggggtaacaagtctgaagactcagcagcgtcacccact 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttgcttggtc-tccggggtaacaagtctgaagactcagcagcgtcacccact 263
Query: 64 ctctagacagggcaggctaggttaagtggactgacatggtccatgtcagtgttgctgctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctctagacagggcaggctaggttaagtggactgacatggtccatgtcagtgttgctgctc 323
Query: 124 aaagaggccatttattactcctcgccatctggtcccatgaaaagctttggtttctgaatc 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagaggccgtttattactcctcgccatctggtcccatgaaaagctttggtttctgaatc 383
Query: 184 ttcccatcggcctttggaagaattagcctctgaattaacccacacacttctggtaaattc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcccatcggcctttggaagaattagcctctgaattaacccacacacttctggtaaattc 443
Query: 244 cttacgacccagagaaatgtcagtggctta 273
||||||||||||||||||||||||||||||
Sbjct: 444 cttacgacccagagaaatgtcagtggctta 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no418_i09.g1 MSMg01no418_i09.g1 CHROMAT_FILE:
MSMg01no418_i09.g1 PHD_FILE: MSMg01no418_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:45 2005
(295 letters)
>mm_chr8_116627145_116627839
Length = 695
Score = 524 bits (271), Expect = e-153
Identities = 289/295 (97%)
Strand = Plus / Minus
Query: 1 ctctttaccgctggttccccatctgtctactgagaagccaagctagcatgagctgggcca 60
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 495 ctctttgccgctggttccccatctgtctactgagaagcgaagctagcatgagctgggcca 436
Query: 61 tcattttgtttagcaagatgaatgtgaaaacttgagaaaattgcttggaagtgtgtctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcattttgtttagcaagatgaatgtgaaaacttgagaaaattgcttggaagtgtgtctgg 376
Query: 121 ctcacaggatgtgtttgttgttacgtggctggtgggactctcattgagaaaaagatggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctcacaggatgtgtttgttgttacgtggctggtgggactctcattgagaaaaagatggcg 316
Query: 181 tgtaggagtaagtctcaggaaatgtcagcatccaagactgaatgaaacaggaggagacag 240
|||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 315 tgtaggagtaagcctcgggaaatgtcagcatccaagactgaacgaaacaggaggagacag 256
Query: 241 caggaataagtagctggagccgaggaaggggtttgtagtggggtgacatcacagg 295
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 caggaataagtaactggagccgaggaaggggtttgtagtggggtgacatcacagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
