TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGCGGATT
CAAACAGCCAGTTTTCTAAAAACAAGGAGNAGAGGGNAAGGNATCAGGGG
CTGGGGAGGGACGCAGAGTGAGATGCGGCAGATGGCACAGAATTTAAGTG
GCATGGGATGAGAGTCCCAAACTCTATGGGACAGATGGCACATATGGTTA
ACAGCAATACATACTTAAAGTGTGCGGGTACGAGGGTTAATTAGGCAATA
TTCCCTTTTTTAATAGAGCCGTAGGGTGTGTGTGTGTGTGTGTGTGTGTT
GACTGGCTCACATCANAGCTTGTTTTGCTCATTTTGAGGCGCAGAGAACC
CCGNAGCACCGCACGCTGTTACCTCGCCCCCCCCAGAAGACGAAGACAAG
CCCAGANNGCCGCACCAGAAAGCCNGAGCNGACCCACCCTACGCCGAAAC
GCTTGATTTAGGTTTTATTGTGTACCCCTTCCTCTTTGCATCTATGCTAT
CAGTTTATTCTTAGATGAGTTCACTCCTTTCCTCTCTCTTTTTCCCTTCG
CCTCCCAAGTCCTGTCCTTTTCTATCCTTGTTTCTTGTATCTTTCGTCCC
TCATAATGCACACCTTATTCATCTCTTGTAATTCTTTGCTTCTCAACTTT
TTCCTCCATCTTCTCTTGCTTTTTTTTTTGTTCCTATACCTTCCCATTGA
CCCCCCTCTTTTTTTTTCTTTTTTCTTCCCCCCGCCTCCCCTCCTCCCTT
TCTTCTTGTATATCCCTCTTCTTCTCTCTCTACTCCCCCTTCGGCCCACT
TTACCTGTTTCATCTTCCTCTCTCTTCTTTCTCG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAATAGGNGACC
TATAGATGGACCATGGCAATAACAACCTCTACTAGGCATTGACTTTGACA
CTATGCTGACATACACAACATGACATTTATTCAGAAGCAGGCCAGTACAA
CCTGGGTACCACGGGCCACAAGAGCCTCAAAATGGCCATGAACCATTGCC
CAGGACAAAAGTCATAAACGTACTTGAAACATTCTGAGATGTTTGCGAGA
TGAAACATTTTCCAATGTGATAGTCCTTGAGGGTGAAGTCTGGAAATGAC
AATGGACTCATAAGGACCATGTAAACTTTTTTCTTTCAGGAAATCTAAAA
GCCCTCAGAATTGTACATAAGTTGAAGGTACCTACGGATAATAGACCAAT
GTATGTTTTTATCTTTATGAGATTCAAAGACGGATCTGAGGCACCTCCTC
CCCTTGCCCACCCATCGAAACACTATTGTTAGGCCAGTATCTTTATTCAC
TGTGGAATTCCAAGCACTGGAGAGTAGATGGCGAGCGAATAAGTGGTGAA
TGGCGAGCCACCCTTTCAACAATGGTCACTTCCATGTTGGTGATGCGGAC
AGGGAATCCCTGGCCCTGGGGAACTGGTTGATACTCCGAACTTAGAATTC
ATCACAGTTGATACCTTTTGTCTGTCTTTATGTGAGGTCACGTACACTGG
GAGAATGCTCCCTATTTGGGACAGCTGCATGTTGTATAGATAGGTCCTAT
TTCTATATGGGTCTAAACGTTTTAGTCACTTGATTCC

Query= MSMg01no421_c02.b1 MSMg01no421_c02.b1 CHROMAT_FILE:
MSMg01no421_c02.b1 PHD_FILE: MSMg01no421_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:10 2005
         (132 letters)



>mm_chr8_120786822_120787353
          Length = 532

 Score =  240 bits (124), Expect = 3e-68
 Identities = 130/132 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcaggggctggggagggacgcagagtgagatgcggcagatggcacagaatttaagtggc 60
           |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 201 atcaggggctggggagggacgcagagggagatgtggcagatggcacagaatttaagtggc 260

                                                                       
Query: 61  atgggatgagagtcccaaactctatgggacagatggcacatatggttaacagcaatacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgggatgagagtcccaaactctatgggacagatggcacatatggttaacagcaatacat 320

                       
Query: 121 acttaaagtgtg 132
           ||||||||||||
Sbjct: 321 acttaaagtgtg 332


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 532
Length adjustment: 8
Effective length of query: 124
Effective length of database: 524
Effective search space:    64976
Effective search space used:    64976
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no421_c02.g1 MSMg01no421_c02.g1 CHROMAT_FILE:
MSMg01no421_c02.g1 PHD_FILE: MSMg01no421_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:11 2005
         (205 letters)



>mm_chr8_120964158_120964762
          Length = 605

 Score =  373 bits (193), Expect = e-108
 Identities = 202/205 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctctactaggcattgactttgacactatgctgacatacacaacatgacatttattcagaa 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 405 ctctactaggcattgactttgacactgtgctgacatacacaacatgacatttattcagaa 346

                                                                       
Query: 61  gcaggccagtacaacctgggtaccacgggccacaagagcctcaaaatggccatgaaccat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gcaggccagtacaacctgggtaccacgggccacaagagcctcaaaatggccatgaaccat 286

                                                                       
Query: 121 tgcccaggacaaaagtcataaacgtacttgaaacattctgagatgtttgcgagatgaaac 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 285 tgcccaggacaaaagtcataaacgtacttgaaacattctgagatgtttacgagattaaac 226

                                    
Query: 181 attttccaatgtgatagtccttgag 205
           |||||||||||||||||||||||||
Sbjct: 225 attttccaatgtgatagtccttgag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space:   117609
Effective search space used:   117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)