MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-421G06
Chromosome	8 (Build37)
Map Location	81,690,382 - 81,690,804
singlet/doublet	singlet
Overlap gene	D630040G17Rik
Upstream gene	Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466, Lsm6, EG666340, EG666346
Downstream gene	1700011L22Rik, Mmaa, A630049P17, Smad1, LOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip, LOC546075
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ttc29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73301 MGI:1920551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pou4f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18997 MGI:102524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039422 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 841 ESTs

name	Rbmxrt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19656 MGI:1343045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc10a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76775 MGI:1924025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Lsm6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78651 MGI:1925901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666340 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666340 MGI:3643693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1040 ESTs, 4 Proteins

name	EG666346 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666346 MGI:3643698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	D630040G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622675 MGI:2444807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700011L22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67687 MGI:1914937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein

name	Mmaa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109136 MGI:1923805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630049P17 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:234479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Smad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17125 MGI:109452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC666388 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC666392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Otud4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73945 MGI:1098801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpd52-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107730 MGI:107737
definition	gene_synonym : Tpd52-rs1 note : tumor protein D52, pseudogene pseudo : _no_value

name	Abce1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24015 MGI:1195458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anapc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68999 MGI:1916249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039439 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Hhip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15245 MGI:1341847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins pseudo : _no_value

name	Ttc29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328520 GeneID:73301 MGI:1920551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 29 transcript_id : NM_183096.2

name	Pou4f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059066 GeneID:18997 MGI:102524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 4, transcription factor 2 transcript_id : NM_138944.2

name	LOC100039422 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258949 GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 564 ESTs product : similar to ribosomal protein S25, transcript variant 2 transcript_id : XM_001472951.1

name	LOC100039422 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258947 GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 840 ESTs product : similar to ribosomal protein S25, transcript variant 1 transcript_id : XM_001472932.1

name	Rbmxrt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83699419 GeneID:19656 MGI:1343045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein, X chromosome retrogene transcript_id : NM_009033.2

name	Slc10a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199772 GeneID:76775 MGI:1924025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 7 transcript_id : NM_029736.1

name	Lsm6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802913 GeneID:78651 MGI:1925901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) transcript_id : NM_030145.2

name	EG666340 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258951 GeneID:666340 MGI:3643693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1040 ESTs, 4 Proteins product : predicted gene, EG666340 transcript_id : XM_983151.2

name	D630040G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358943 GeneID:622675 MGI:2444807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630040G17 gene transcript_id : NM_178267.3

name	1700011L22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383663 GeneID:67687 MGI:1914937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein product : RIKEN cDNA 1700011L22 gene, transcript variant 1 transcript_id : XM_134463.3

name	Mmaa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383676 GeneID:109136 MGI:1923805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylmalonic aciduria (cobalamin deficiency) type A transcript_id : NM_133823.3

name	A630049P17 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258945 GeneID:234479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein A630049P17 transcript_id : XM_001472774.1

name	Smad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476186 GeneID:17125 MGI:109452
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 1 (Drosophila) transcript_id : NM_008539.3

name	Otud4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487190 GeneID:73945 MGI:1098801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OTU domain containing 4 transcript_id : NM_001081164.1

name	Abce1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205430 GeneID:24015 MGI:1195458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family E (OABP), member 1 transcript_id : NM_015751.2

name	Anapc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130278 GeneID:68999 MGI:1916249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anaphase promoting complex subunit 10 transcript_id : NM_026904.2

name	Hhip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328502 GeneID:15245 MGI:1341847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hedgehog-interacting protein transcript_id : NM_020259.3

name	Ttc29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328521 CCDS:CCDS22428.1 GeneID:73301 MGI:1920551
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : NYD-SP14 protein protein_id : NP_898919.2

name	Pou4f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059067 CCDS:CCDS22429.1 GeneID:18997 MGI:102524
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence TAS] [Evidence ISS] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence TAS]; GO:0002073 - retina development (sensu Mammalia) [Evidence IMP] codon_start : 1 note : POU domain, class 4, transcription factor, related sequence 1 product : POU domain, class 4, transcription factor 2 protein_id : NP_620394.2

name	LOC100039422 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258948 GeneID:100039422
definition	codon_start : 1 product : similar to ribosomal protein S25 isoform 1 protein_id : XP_001472982.1

name	LOC100039422 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258950 GeneID:100039422
definition	codon_start : 1 product : similar to ribosomal protein S25 isoform 2 protein_id : XP_001473001.1

name	Rbmxrt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83699420 CCDS:CCDS22430.1 GeneID:19656 MGI:1343045
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : hnRNP G product : RNA binding motif protein, X chromosome retrogene protein_id : NP_033059.2

name	Slc10a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199773 GeneID:76775 MGI:1924025
definition	codon_start : 1 product : solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein_id : NP_084012.1

name	Lsm6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865835 GeneID:78651 MGI:1925901
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006402 - mRNA catabolism [Evidence ISS]; GO:0016071 - mRNA metabolism [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : LSM6 homolog, U6 small nuclear RNA associated protein_id : NP_084421.1

name	EG666340 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383687 GeneID:666340 MGI:3643693
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988245.1

name	D630040G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124358944 GeneID:622675 MGI:2444807
definition	codon_start : 1 product : hypothetical protein LOC622675 protein_id : NP_839998.2

name	1700011L22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20885420 GeneID:67687 MGI:1914937
definition	codon_start : 1 product : hypothetical protein LOC67687 isoform 1 protein_id : XP_134463.1

name	Mmaa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541923 CCDS:CCDS22436.1 GeneID:109136 MGI:1923805
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] codon_start : 1 product : methylmalonic aciduria type A protein_id : NP_598584.2

name	A630049P17 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258946 GeneID:234479
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472824.1

name	Smad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543220 CCDS:CCDS22437.1 GeneID:17125 MGI:109452
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0030509 - BMP signaling pathway [Evidence IMP] [Evidence ISS] [Evidence TAS]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0042592 - homeostasis [Evidence IMP]; GO:0000165 - MAPKKK cascade [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : Smad 1 product : MAD homolog 1 protein_id : NP_032565.2

name	Otud4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487191 GeneID:73945 MGI:1098801
definition	codon_start : 1 product : HIV-1 induced protein HIN-1 protein_id : NP_001074633.1

name	Abce1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205431 CCDS:CCDS22438.1 GeneID:24015 MGI:1195458
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) inhibitor; RNS4l (Eye) product : ATP-binding cassette, subfamily E, member 1 protein_id : NP_056566.2

name	Anapc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:35900980 CCDS:CCDS22439.1 GeneID:68999 MGI:1916249
definition	GO_component : GO:0005680 - anaphase-promoting complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0030071 - regulation of mitotic metaphase/anaphase transition [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : anaphase-promoting complex subunit 10 protein_id : NP_081180.1

name	Hhip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328503 CCDS:CCDS22440.1 GeneID:15245 MGI:1341847
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0030324 - lung development [Evidence IMP]; GO:0045879 - negative regulation of smoothened signaling pathway [Evidence IDA]; GO:0007405 - neuroblast proliferation [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0040036 - regulation of fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007224 - smoothened signaling pathway [Evidence IMP] codon_start : 1 exception : mismatches in translation note : hedgehog-interacting product : Hedgehog-interacting protein protein_id : NP_064655.3

name	LOC100039466 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039466
definition	number : 1 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 3 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 2 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 1 pseudo : _no_value

name	LOC666378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666378
definition	number : 1 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 3 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 2 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 1 pseudo : _no_value

name	LOC666392 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666392
definition	number : 1 pseudo : _no_value

name	LOC100039439 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039439
definition	number : 2 pseudo : _no_value

name	LOC100039439 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039439
definition	number : 1 pseudo : _no_value

name	LOC546075 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258956 GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins product : similar to erythropoietin 4 immediate early response pseudo : _no_value transcript_id : XR_031274.1

clone name	MSMg01-046K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-442P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-421G06.T7 (MSMg01no421_g06.b1)	MSMg01-421G06.TJ (MSMg01no421_g06.g1)
ACC	AG516029	AG516030
length	788	1,176
length of high quality (start - end)	421 (77 - 497)	---
definition	CHROMAT_FILE: MSMg01no421_g06.b1 PHD_FILE: MSMg01no421_g06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:41:33 2005	CHROMAT_FILE: MSMg01no421_g06.g1 PHD_FILE: MSMg01no421_g06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:41:33 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTAGAATACCGCGGAA TTCCCTCTTTTATATCTCAAACTCAGGTGATCCACACTGCTTCTGCCTTC TGAGTGCCACCATCACCAGGACAGGGGACTTTTATTTTTTTATCCAAGGA ATATTTATTGTAATTTTTCCCCTAAAAGTATTTGTCTTTTTTATTTATTT TTTACTTTGGAAAAATGCAACAACAATCTTTACTTTTATCACGTAAAAAA ACACTTATCCACAATTTTTTAAAATCTTGATTCTGAAATACTATTTGATT AAGCAGAATATTTTTCATATGTTGATGATTTCTGTAGCTGGCTTATTTAA TTGCTCTCCATGCATGTAATTCCAGACACAGGGCTGAGAGTTCTGCTTGC TCCTTTGAGCACAGACTGATGACTTAGAGGTAACAAAATGGATCCTCTAG CTTTGGGGGTGGGAAGCACCAGAGGAAGGCAGTGAAGGGCCTCAGATGAC CTCCTTCTGTGAGGAAGGCACTAATCTCGCTCATGCATGCCCCATCCCAC CACCTGACCACTCCCGAGGCCTCACCGTCTTACCGTCTACATGGTGTTAG GAAATTTTCCGTGCTAGCAGTTTGTTATTGAACTACCGTGGATAAACACT TTACATTGCTAGGTCATATCTTTTTTTTATTTATTCTGTGGTGCATTTAC TCTGCTAAGGTCTTTCTTCTTGGAGTGGCTCTATCGTTACTCCTCCTTAC CAGTAACAATAAGGTCAAGCGCCTTTCTTTCTTTCTCN	GGGGCTGAGCGCCCCGAAAAAAAAGGGGCAGGANNGGGGATAAACCGCAG GAAGTTTATTCCACAAAAGAAGGGAGAAAAAAAAAAAAGATGTTTTTTCC CACGAGCGACGGGGCAATGAAGGTACAAGATATAATGGCCCGCCCGATCG AACACCCTGACCGCGTCGTATGTGCACCCGCGTTGCAGAGGTTGCATCTA TAAAACATTGAACAGCGTTGCTTGACTAGCCCGCACAACTCACCCTCAAC AAAATTCTGCGCCCGCTCGCGCGTGCTCTAATACAAACGCAAAAATAGAG CAACTCGCTGCCGCGCGCGCTAGACGGCTACAACAGACAAAAGTAAAATA ATACAAAAACGCAAAACCGTGAGATGCGACGCGAACGTCCAGACAGATTA TCCACATGTACACAAAAGCATTGACGCGAGAGCCGCCGTCAGGAGTGCCG TCCGGCGACTGTGATCGTCGGAGAGCAGCCCTCATACCCAACGCAGACAC TAATACATCCTCTTCTTAGATTATATTCAGGAACAATAGAAATGAGTTAG AGGGACAAGGAGCAGATCACTACAGATGATGCAGACTAGAAAGATAACGA ATCGAAGAACGATAAAGCGGGAAACACTATATGCAACCAACAACATAAAT CATGCAACAAGACTCCGACAGAACGAAGATACGAGTATCAGATGAACACA AAACAGAGAGAGAACACAAAGACAACTCGAACAATACAATAACGAAAAAT ATAAACGAATATAGACGAGTGAGAAAGCAATCGGTACAGAGCAGTACTTG ACGACGCCGACTTATAATCTCTCAAATGCAATAAGAACAATCTGCGCAAA CAACTAATACAACAAGCGAAATACGATACCACTCTCAGAAAGATAGAAGC AGCGTGGACGCGTATAACACGGACGTTGTGACGGGTAAGTATTACTAGAC ATCTGGCGCGATGTCGCCGACACGTTCTTTCCATGACGCTTTCGGTAGTA GGTGCCGTGATGATGTCGCGCCAGACCGGACTATGATACACATCACAACG CATACACAAACGATCATCTAGCATACGAACTGTTGTTTAGAGACGCCGTG CATAAGAATTAAATTCATCGACAATCGCGGCCATCTTAGCGTGCCGTGAT ATCATCCACGAGCGAACACAGACTCN
quality values	Open. Hide. 8 8 8 8 13 19 30 41 39 39 37 31 17 19 9 9 10 22 22 47 48 44 29 28 28 28 25 29 41 39 21 10 9 7 8 8 8 10 10 8 8 8 10 10 10 18 15 26 26 31 31 33 31 47 47 47 59 59 27 21 9 9 7 8 8 7 9 12 24 29 19 13 13 15 12 21 21 19 28 33 33 36 36 47 47 43 43 43 47 48 42 42 43 43 43 43 39 43 39 43 39 43 43 46 39 36 39 36 43 39 47 47 47 36 36 19 21 12 12 12 13 19 19 16 10 11 26 26 42 47 48 48 54 57 57 57 57 59 48 48 47 57 32 37 28 28 32 36 29 36 35 35 37 50 50 50 57 50 50 36 36 43 43 43 43 43 52 57 57 57 44 32 24 12 12 21 18 32 24 32 33 43 43 43 32 32 43 43 52 52 52 52 52 52 43 43 43 52 52 52 52 52 59 57 52 52 43 43 41 38 50 50 50 50 50 50 50 37 43 43 32 24 24 20 20 20 44 44 43 44 44 57 57 57 57 50 54 50 50 43 37 37 24 24 14 14 14 18 28 28 36 24 28 12 12 11 12 11 12 16 24 28 42 42 47 42 48 48 46 46 46 47 47 43 47 47 54 57 57 57 57 48 48 43 43 43 43 48 39 42 39 43 43 43 43 48 47 47 33 28 18 24 30 39 57 57 32 41 32 35 39 39 43 43 41 41 47 39 34 32 25 24 20 27 14 11 11 17 21 32 37 37 47 28 28 23 32 32 43 34 37 30 28 33 33 43 39 43 43 57 43 39 39 35 35 39 39 39 59 43 28 24 16 11 11 11 11 12 28 28 28 28 14 14 12 15 12 13 14 32 32 48 47 42 32 44 30 28 28 36 44 37 37 42 33 33 33 44 44 59 48 48 48 59 59 59 59 54 54 54 50 57 47 48 48 59 59 59 39 37 37 44 44 44 44 21 18 14 25 25 35 31 28 27 20 20 20 24 28 37 36 43 44 57 48 57 41 41 24 20 20 41 41 47 43 32 32 30 32 32 36 30 30 30 39 31 32 27 26 15 13 14 14 18 24 33 31 33 30 30 17 19 19 22 24 23 28 31 32 35 30 32 22 16 12 12 21 20 15 10 10 16 25 24 29 29 17 14 9 9 9 10 19 24 33 37 33 34 24 22 22 22 17 20 24 28 30 29 17 17 25 28 28 23 21 12 11 11 18 19 17 19 16 19 15 15 15 19 19 15 13 12 12 12 16 22 12 11 11 11 12 12 22 17 11 11 11 16 12 11 11 11 9 11 11 12 15 12 16 9 9 9 10 10 8 10 10 10 10 12 12 10 8 6 8 6 6 8 8 8 8 16 13 13 18 19 17 8 8 8 8 8 8 8 8 8 8 8 10 10 9 13 8 8 8 8 6 6 6 6 8 8 8 8 8 10 15 10 8 8 8 10 11 10 9 9 8 8 8 12 12 8 8 8 8 13 12 21 19 10 10 9 10 8 10 10 8 8 9 9 9 10 10 10 10 10 15 10 8 8 8 8 7 10 11 10 10 7 9 9 10 10 11 11 11 8 8 8 8 8 8 8 8 10 11 12 8 8 8 8 6 7 8 9 10 8 9 9 13 13 8 8 8 8 8 8 7 7 8 6 8 8 8 8 10 15 15 12 9 9 9 13 10 8 8 8 10 8 8 12 8 8 8 8 8 9 8 6 6 7 8 8 9 8 8 8 8 8 6 8 6 6 10 8 9 11 13 14 11 13 9 9 8 8 9 9 3 0	Open. Hide. 7 10 8 6 6 6 8 8 12 15 9 8 8 8 8 8 8 8 13 15 12 8 9 10 10 10 8 8 8 8 8 6 3 0 0 3 11 11 10 8 10 8 11 8 8 8 8 8 8 8 8 8 8 8 7 9 7 6 6 6 7 6 6 6 10 8 8 8 8 7 9 6 10 6 6 8 10 10 15 19 22 15 16 12 12 12 16 12 11 8 6 6 6 9 7 16 12 12 9 11 9 8 8 6 8 6 6 6 6 8 10 12 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 10 15 10 8 6 7 8 8 10 10 8 8 8 8 8 8 6 6 8 6 9 10 10 8 7 6 6 6 6 8 8 8 8 8 8 8 6 6 6 8 8 8 10 10 10 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 12 8 10 10 12 10 15 10 10 9 10 10 9 13 9 9 9 6 8 6 6 8 8 8 9 9 10 9 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 10 8 8 8 8 9 9 12 10 9 9 8 8 10 10 11 8 9 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 12 11 9 9 8 8 6 6 6 8 11 13 10 10 9 9 9 10 10 10 15 12 12 10 6 6 6 6 8 6 8 9 8 8 8 8 8 8 8 8 8 8 6 6 8 8 6 6 8 8 11 6 6 6 6 10 10 8 9 9 8 8 8 6 6 8 8 8 8 8 6 6 8 10 10 8 8 8 8 9 8 8 6 6 8 8 8 8 8 8 10 10 8 8 6 6 6 8 8 9 9 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 11 8 8 8 10 8 9 9 10 10 10 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 11 13 11 11 11 9 8 7 7 8 8 6 6 6 6 8 8 10 8 8 8 8 9 9 9 9 13 10 8 6 6 8 10 11 10 10 8 8 8 8 8 8 8 10 8 10 9 10 10 10 8 8 8 8 10 8 8 8 9 9 9 9 9 9 9 11 9 8 8 8 8 10 10 8 9 9 9 8 8 8 8 8 8 8 8 8 9 9 8 8 6 6 10 8 6 8 8 8 8 8 8 8 8 8 8 9 9 6 6 6 6 6 6 7 8 7 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 8 8 9 7 7 8 8 6 6 6 6 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 6 6 8 8 8 8 8 8 8 11 12 8 8 8 8 8 6 6 8 8 11 8 8 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 10 9 9 12 6 7 7 6 8 8 8 8 10 11 12 10 10 9 9 7 8 6 6 6 6 8 8 6 8 8 8 8 6 8 6 6 8 8 9 10 8 8 8 8 10 10 8 8 8 10 10 10 10 10 10 8 10 14 10 7 7 10 8 9 9 8 10 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 10 8 8 6 6 8 6 6 8 6 6 7 7 7 8 11 9 9 9 7 7 7 8 7 8 11 12 11 11 11 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 11 12 10 11 11 11 8 8 6 6 8 6 8 10 12 12 10 8 8 8 9 8 8 12 12 12 8 8 8 8 8 10 9 6 6 6 6 6 8 9 9 9 6 10 7 9 9 10 10 8 6 6 6 6 8 10 8 8 8 8 8 8 10 10 13 9 9 9 10 10 13 11 11 9 12 9 9 10 10 10 10 10 8 8 7 7 8 8 10 8 8 6 6 8 8 8 8 6 6 6 7 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 10 10 14 9 9 8 8 8 6 8 8 9 9 9 8 8 6 6 8 6 7 8 10 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 10 8 9 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 9 9 9 9 8 8 6 7 10 10 9 9 10 11 8 8 6 6 10 10 10 8 9 9 7 8 8 10 10 7 7 8 7 6 8 8 9 9 9 12 10 8 6 6 6 6 8 8 8 8 8 8 8 6 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 7 9 9 12 8 8 6 6 6 6 10 10 10 6 6 8 8 6 8 6 10 6 6 6 6 7 8 11 8 8 8 8 10 9 11 11 16 8 8 6 6 6 6 9 6 8 6 6 7 7 10 13 13 12 9 9 9 10 8 8 8 8 8 10 9 9 10 10 10 10 8 8 6 8 6 6 8 6 6 8 8 6 6 6 8 10 10 8 8 8 8 8 8 9 9 10 8 6 6 6 6 6 8 10 8 8 8 8 8 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no421_g06.b1 MSMg01no421_g06.b1 CHROMAT_FILE:
MSMg01no421_g06.b1 PHD_FILE: MSMg01no421_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:33 2005
         (421 letters)



>mm_chr8_81690182_81691004
          Length = 823

 Score =  694 bits (359), Expect = 0.0
 Identities = 407/425 (95%), Gaps = 6/425 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtgatccacactgcttctgccttctgagtgccaccatcaccaggacaggggacttttatt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 gtgatccacactgcttctgccttctgagtgccaccatcaccaggacagggtacttttatt 564

                                                                       
Query: 61  tttttatccaaggaatatttattgtaatttttcccctaaaagtatttgtcttttttattt 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 563 tttttatccaaggaatatttattgtaattttt-ccctaaaagtatttgtcttttttattt 505

                                                                       
Query: 121 attttttactttggaaaaatgcaacaacaatctttacttttatcacgt----aaaaaaac 176
           |||||||||||||||||||| |||||||||||||||||||||||||||    ||||||||
Sbjct: 504 attttttactttggaaaaatacaacaacaatctttacttttatcacgttaaaaaaaaaac 445

                                                                       
Query: 177 acttatccacaattttttaaaatcttgattctgaaatactatttgattaagcagaatatt 236
            | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444 -cataaccacaattttttaaaatcttgattctgaaatactatttgattaagcagaatttt 386

                                                                       
Query: 237 tttcatatgttgatgatttctgtagctggcttatttaattgctctccatgcatgtaattc 296
           ||||||||| ||| ||||||| |||||||||||||||||| ||||||||||| | |||||
Sbjct: 385 tttcatatggtgaggatttctttagctggcttatttaattactctccatgcagggaattc 326

                                                                       
Query: 297 cagacacagggctgagagttctgcttgctcctttgagcacagactgatgacttagaggta 356
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagacacaggactgagagttctgcttgctcctttgagcacagactgatgacttagaggta 266

                                                                       
Query: 357 acaaaatggatcctctagctttgggggtgggaagcaccagaggaaggcagtgaagggcct 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaaaatggatcctctagctttgggggtgggaagcaccagaggaaggcagtgaagggcct 206

                
Query: 417 cagat 421
           |||||
Sbjct: 205 cagat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 823
Length adjustment: 9
Effective length of query: 412
Effective length of database: 814
Effective search space:   335368
Effective search space used:   335368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information