Query= MSMg01no421_i23.b1 MSMg01no421_i23.b1 CHROMAT_FILE:
MSMg01no421_i23.b1 PHD_FILE: MSMg01no421_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:46 2005
(590 letters)
>mm_chr8_66994223_66995212
Length = 990
Score = 1118 bits (578), Expect = 0.0
Identities = 587/590 (99%)
Strand = Plus / Plus
Query: 1 tatcatattcttataggttaataaaaaataacttaaatggcatcctaaaatcacatctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatcatattcttataggttaataaaaaataacttaaatggcatcctaaaatcacatctaa 260
Query: 61 cctggtagagaaatgacatttccatatggaaaagttgtaagattttataaaagctacatc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 cctggtagagaaatgacatttccatatggaaaagttgtgagattttataaaagctacatc 320
Query: 121 ctgatggtaagtggagagccccttattttcccaaccctactgatagcgaatacaaggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgatggtaagtggagagccccttattttcccaaccctactgatagcgaatacaaggctc 380
Query: 181 agaactaaatatgggagcatcaagatacttcctcatgggtcccacgagccaaggaagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaactaaatatgggagcatcaagatacttcctcatgggtcccacgagccaaggaagaga 440
Query: 241 aggaacatgaaacaatgctggtaattcatcaaaacctataaagatgtgcccacgatggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaacatgaaacaatgctggtaattcatcaaaacctataaagatgtgcccacgatggtc 500
Query: 301 taggagcagagagctggaattttacttctggaagtttcagagtgactatagaaggacata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggagcagagagctggaattttacttctggaagtttcagagtgactatagaaggacata 560
Query: 361 tgccttcacttcaactaagagcaggagaaatgcaggtccaatgtaggagtatcagcaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgccttcacttcaactaagagcaggagaaatgcaggtccaatgtaggagtatcagcaacg 620
Query: 421 tatgtgtgggatgtggattcccagtgaccctggctggccccgcaaacctgtagctagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatgtgtgggatgtggattcccagtgaccctggctggccccgcaaacctgtagctagcag 680
Query: 481 catctgaaactggcccaaggcccaggcttacagctgacaggtgtgtatgcagaaaggaag 540
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 cgtctgaaactggcccaaggcccaggcttacagctgacaggtgtgtatccagaaaggaag 740
Query: 541 gccagctcgatgtgagatttcacacgcttcactcctaaaacccttttcct 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gccagctcgatgtgagatttcacacgcttcactcctaaaacccttttcct 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_i23.g1 MSMg01no421_i23.g1 CHROMAT_FILE:
MSMg01no421_i23.g1 PHD_FILE: MSMg01no421_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:47 2005
(419 letters)
>mm_chr8_67157827_67158644
Length = 818
Score = 787 bits (407), Expect = 0.0
Identities = 416/419 (99%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 1 ttcttttattggtggtattcctttaacgtggaagttgagcttacttggttgctgggatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttcttttattggtggtattcctttaacgtggaagttgagcttacttggttgctgggatcc 559
Query: 61 catgacctctgcacgcaagggggagggaatgaatggggatgtgtttcttaagtgagcgca 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 catgacctctgcacgcaa-ggggagggaatgaatggggatgtgtttcttaagtgagcgca 500
Query: 121 cacaagggtgaggcctgctggtatgttctcaagaattcattggctaaagttcgcatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cacaagggtgaggcctgctggtatgttctcaagaattcattggctaaagttcgcatgttt 440
Query: 181 gtggatgctctacagacagtagcatagggaatgcattcatactccggccaatatttgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtggatgctctacagacagtagcatagggaatgcattcatactccggccaatatttgcat 380
Query: 241 gaggctgagaattctctcttttgtagaccatgtaacactttccatgatgttctcagaccc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaggctgagaaggctctcttttgtagaccatgtaacactttccatgatgttctcagaccc 320
Query: 301 aggtcatactctatggtatcgaagggctctgctaacaacatttacgtataaacattctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggtcatactctatggtatcgaagggctctgctaacaacatttacgtataaacattctaa 260
Query: 361 tagtatgaatcgtcaggaaagaagcaatgactttcattcatgaggtgctcggaaatgcc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tagtatgaatcgtcaggaaagaagcaatgactttcattcatgaggtgctcggaaatgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
