Query= MSMg01no421_k09.b1 MSMg01no421_k09.b1 CHROMAT_FILE:
MSMg01no421_k09.b1 PHD_FILE: MSMg01no421_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:54 2005
(176 letters)
>mm_chr8_50036204_50036779
Length = 576
Score = 319 bits (165), Expect = 5e-92
Identities = 173/176 (98%)
Strand = Plus / Minus
Query: 1 cttagaatgataggncatggaaacctttatcctgttggcggatgccagcaaccaactctt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cttagaatgataggtcatggaaacctttatcctgttggcggatgccagcaaccaactctt 317
Query: 61 gttgtgttgtgtgcctgggcctcctctgggactgtctccagctgccctccaccctcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gttgtgttgtgtgcctgggcctcctctgggactgtctccagctgccctccaccctcttcc 257
Query: 121 aaaggctgttctgttgtcaaagatgactgatggctcagctaggcataatggcagcc 176
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 256 aaaggctgttctgttgtcaaagataactgagggctcagctaggcataatggcagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_k09.g1 MSMg01no421_k09.g1 CHROMAT_FILE:
MSMg01no421_k09.g1 PHD_FILE: MSMg01no421_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:54 2005
(243 letters)
>mm_chr8_49861668_49862311
Length = 644
Score = 393 bits (203), Expect = e-114
Identities = 230/243 (94%), Gaps = 9/243 (3%)
Strand = Plus / Plus
Query: 1 atcccctcctccctc-aaaatagccatgtttcaggactctaggattcagtgtctttctac 59
||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 201 atcccctcctccctcaaaaatagccatgtttcaggacgcaaggattcagtgtctttctac 260
Query: 60 aaatcagtaagtttaactatttgagcggtagtttttatagatggttgtacagttggctcc 119
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 aaatcagtaagtttaactatttgagcggtagtttttatagatggtcgtacagttggctcc 320
Query: 120 ctaagaatctgccagatctcaagtaattgacatggtgagtttattttcataatctttt-- 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaagaatctgccagatctcaagtaattgacatggtgagtttattttcataatc----ac 376
Query: 178 --ctactttcttctcaacttcagactgccgcctgatttttaatatgcctttgtatacaat 235
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 accaactttcttctcaacttcagactgccgcctgatttttaatatgcctttgtatacaat 436
Query: 236 gca 238
|||
Sbjct: 437 gca 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
