Query= MSMg01no422_p22.b1 MSMg01no422_p22.b1 CHROMAT_FILE:
MSMg01no422_p22.b1 PHD_FILE: MSMg01no422_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:34 2005
(475 letters)
>mm_chr8_113084606_113085480
Length = 875
Score = 895 bits (463), Expect = 0.0
Identities = 472/475 (99%)
Strand = Plus / Plus
Query: 1 tcccttcctagacataggaaagccctctcttatccccacatcctagaagacaggacctca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tcccttcctagacataggaaagccctctcttatccccacatcctagaagaaaggacctca 260
Query: 61 agcagtgtctcatgtcctcatcaaaatctgaggctgtactcttgcatctctgatcagaac 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagtgtctcgtgtcctcatcaaaatctgaggctgtactcttgcatctctgatcagaac 320
Query: 121 cagccacatgaggcatggaagaacccgagagagtgaaagcttctacaagcctggagcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccacatgaggcatggaagaacccgagagagtgaaagcttctacaagcctggagcaac 380
Query: 181 taaaatggccaagttctcagacacagtccagaaagacacgaacatagcaaaccaggtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatggccaagttctcagacacagtccagaaagacacgaacatagcaaaccaggtaag 440
Query: 241 tcacacaaacacagcgaacacttttctcctatacttccctcttttttaaattttgtatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacacaaacacagcgaacacttttctcctatacttccctcttttttaaattttgtatat 500
Query: 301 attttggatttgtgcacatgagtgcaggtactgatgaagccagagacagacggcatcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttggatttgtgcacatgagtgcaggtactgatgaagccagagacagacggcatcagg 560
Query: 361 tcccatgaggttacagttacaggcatatcttagagcttaatccctgtgaagagacatgac 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccatgaggtgacagttacaggcatatcttagagcttaatccctgtgaagagacatgac 620
Query: 421 gaccacagcaactcttacgaaggaaaacatttgattgaggctggctacagtttca 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaccacagcaactcttacgaaggaaaacatttgattgaggctggctacagtttca 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_p22.g1 MSMg01no422_p22.g1 CHROMAT_FILE:
MSMg01no422_p22.g1 PHD_FILE: MSMg01no422_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:34 2005
(376 letters)
>mm_chr8_113279515_113280290
Length = 776
Score = 669 bits (346), Expect = 0.0
Identities = 358/362 (98%), Gaps = 2/362 (0%)
Strand = Plus / Minus
Query: 16 actagatcaggctggcctccaactcaggaatctatctccccctgcctttgctaggattaa 75
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 776 actagatcaggctggcctccaactcaggaatctatctccctctgcctttgctaggattaa 717
Query: 76 aagctatccatcaccacacccagtcttttgtctgtttttttagagacagaatcttgctat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aagctatccatcaccacacccagtcttttgtctgtttttttagagacagaatcttgctat 657
Query: 136 gtggctctgtctggcttctccatcctcctgcttcgatctctagggtgctgcgattactcc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gtggctctgtctggcttctccatcctcctgcttcgatctctagggtgctgcgattactcc 597
Query: 196 gctgtgtgctacacctggctatgatatttatttcttcattcgctt-gcttgtttattggc 254
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 596 gctgtgtgctacacctggctatgatatttatttcttcattcg-ttcgcttgtttattggc 538
Query: 255 acaagcgtgccccaccccatgcaatattgggtgcctacaatattgcacatcaaatacttc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 acaagcgtgccccaccccatgcaatattgggtgcctacaatattgcacatcaaatacttc 478
Query: 315 actagaaagagtgttcgtttatctggaattcacattaaaccggccccatcagctcttccc 374
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 477 actagaaagagtgttcgtttatctggaattcagattaaaccggccccatcagctcttccc 418
Query: 375 tg 376
||
Sbjct: 417 tg 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
