Query= MSMg01no423_a24.b1 MSMg01no423_a24.b1 CHROMAT_FILE:
MSMg01no423_a24.b1 PHD_FILE: MSMg01no423_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:39 2005
(513 letters)
>mm_chr8_101153258_101154170
Length = 913
Score = 946 bits (489), Expect = 0.0
Identities = 511/527 (96%), Gaps = 14/527 (2%)
Strand = Plus / Plus
Query: 1 tttagtaaaaacaatcacagagaaacacttataaatgaaaagaatgtttttataaagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttagtaaaaacaatcacagagaaacacttataaatgaaaagaatgtttttataaagtat 246
Query: 61 tagcaatagatcctctccctccctctcccttcctctccctctcgcccactccctctccct 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 247 tagcaatagatcctctccctccctctcccttcctctccctcttgcccactccctctccct 306
Query: 121 cccccgactctgtgtgtgtgtgtgtgtgtgt--------------ataccttgttcatgg 166
||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 307 ccccccactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataccttgttcatgg 366
Query: 167 tagcccaagttctaaagatgtgttgataaaatgaacagaaaattgctatgcatttgatga 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tagcccaagttctaaagatgtgttgataaaatgaacagaaaattgctatgcatttgatga 426
Query: 227 taaattaaggtgatttcacatatgtatcttctggggctatcagaaaataattataaatgc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 taaattaaggtgatttcacatatgtatcttctggggctatcagaaaataattataaatgc 486
Query: 287 ataaatttggttacagagacacaaatttgtcaatattatcaatgaacaaaacagaaaata 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ataaatttggttacagagacacaaatttgtcaatattatcaatgaacaaaacagaaaata 546
Query: 347 gtctagcattattttctcaagcagaaaaaaatacataagaatattgattagccttgcata 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtctagcattattttctcaagcagaaaaaaatacataagaatattgattagccttgcata 606
Query: 407 gtgtgctaatgaaatgaaagattattaaagtatcatttttttctcttagaactgtaattc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtgtgctaatgaaatgaaagattattaaagtatcatttttttctcttagaactgtaattc 666
Query: 467 tcatttctatgaatttaaaagatataaccttcactttttatttcttg 513
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tcatttctatgaatttaaaagatataaccttcactttttatttcttg 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_a24.g1 MSMg01no423_a24.g1 CHROMAT_FILE:
MSMg01no423_a24.g1 PHD_FILE: MSMg01no423_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:39 2005
(515 letters)
>mm_chr8_101339976_101340890
Length = 915
Score = 988 bits (511), Expect = 0.0
Identities = 514/515 (99%)
Strand = Plus / Minus
Query: 1 acttattgattgacattatcaagcaggtagacagacactgtagcaggtaaaattgctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acttattgattgacattatcaagcaggtagacagacactgtagcaggtaaaattgctttt 656
Query: 61 tttgtgttgttgcctgccaaactttaacagagaaagtgatgtgcttttgccagggagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tttgtgttgttgcctgccaaactttaacagagaaagtgatgtgcttttgccagggagggc 596
Query: 121 tactatacaatcaggtaatgggtcttaagaatgctgcaaacattaatggtgtttgatcaa 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 595 tactatacaatcaggtaatgggtcttaaaaatgctgcaaacattaatggtgtttgatcaa 536
Query: 181 taatattactaccacaggtaaaatgctactccatttattattaagatattgctgaaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taatattactaccacaggtaaaatgctactccatttattattaagatattgctgaaaatg 476
Query: 241 gagtgactcaaaggacttctagaaagtatgaataattgctatatcattagtccaatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gagtgactcaaaggacttctagaaagtatgaataattgctatatcattagtccaatgaaa 416
Query: 301 tgttaatggaagttttgtcatataacatgctgtgagtatttttttctgaaagattttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tgttaatggaagttttgtcatataacatgctgtgagtatttttttctgaaagattttaga 356
Query: 361 gttcctctgagctaatgcctgacacagacccacaattaccctatcaaagtctaatcttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gttcctctgagctaatgcctgacacagacccacaattaccctatcaaagtctaatcttcc 296
Query: 421 tcctatccatgagctagtccagatagacaaagatgtcattaattctttattgctatattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tcctatccatgagctagtccagatagacaaagatgtcattaattctttattgctatattt 236
Query: 481 aatttttttcaaactatatcatgaaatataagccg 515
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aatttttttcaaactatatcatgaaatataagccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
