Query= MSMg01no423_g24.b1 MSMg01no423_g24.b1 CHROMAT_FILE:
MSMg01no423_g24.b1 PHD_FILE: MSMg01no423_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:07 2005
(453 letters)
>mm_chr8_8272423_8273276
Length = 854
Score = 835 bits (432), Expect = 0.0
Identities = 444/448 (99%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 7 gaattctgcctctttcc-aagctagttccacacagtaccttcagttttcttcagccagta 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctgcctctttcctaagctagttccacacagtaccttcagttttcttcagccagta 266
Query: 66 tcctatgttcttgtcatctacctagctatataaagcaggaataaagaggcaagactatcc 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcctatgttcttgtcatctacctagctatataaagcaggaataaagaggcaagactatca 326
Query: 126 ctatgtctatagtatcttcacaatagaaaaactcttatacctattcatttagctgtagat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctatgtctatagtatcttcacaatagaaaaactcttatacctattcatttagctgtagat 386
Query: 186 gccagaaatggttttaccctcagtgtcaaccaaagctcttttaagacttgcatgcaggaa 245
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 387 gccagaaatggttttaccctcagtgtcaaccaaagctcttttaagacttccatgcaggaa 446
Query: 246 atctgatcttgacacatgttgctagactctgccactgtctagacccatgatgtcaaccct 305
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atctgatcttgatacatgttgctagactctgccactgtctagacccatgatgtcaaccct 506
Query: 306 ctcactctggaatcttttatgctgggatgactatcattatatgggggctggtatgaagtc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctcactctggaatcttttatgctgggatgactatcattatatgggggctggtatgaagtc 566
Query: 366 gtgctaccaattgaagatgcaacatggccctttggaccacaccttctgtagcctctgtgc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgctaccaattgaagatgcaacatggccctttggaccacaccttctgtagcctctgtgc 626
Query: 426 attcatttttaaaattgaactattaacc 453
||||||||||||||||||||||||||||
Sbjct: 627 attcatttttaaaattgaactattaacc 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_g24.g1 MSMg01no423_g24.g1 CHROMAT_FILE:
MSMg01no423_g24.g1 PHD_FILE: MSMg01no423_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:07 2005
(381 letters)
>mm_chr8_8419161_8419941
Length = 781
Score = 714 bits (369), Expect = 0.0
Identities = 378/381 (99%)
Strand = Plus / Minus
Query: 1 agttaggaaaatgaaattcatttctggtcttcgacgagactgggaatgcacagcagagca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 458 agttaggaaaatgaaattcatttctggtcttcgatgagactgggaatgcacagcagagca 399
Query: 61 caccagcaagcccgcagtggaaaaccttcgtcatgctttggtatgcactgtgacagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caccagcaagcccgcagtggaaaaccttcgtcatgctttggtatgcactgtgacagtgtt 339
Query: 121 gttagttttcagaacctgtgttctggtgcttggataactctggagactatcaacgtgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 338 gttagttttcagaacctgtgttctggtgcttggataactctggagactatcaaagtgaag 279
Query: 181 gaaacatcacaggaaaaaatgttctttggttacacagctctgagagggtgtccctgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gaaacatcacaggaaaaaatgttctttggttacacagctctgagagggtgtccctgtgcc 219
Query: 241 cacaacacaggtatgctctgtgtgtgtgtgtttgtgtgtatacaccacaggccacacatc 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 218 cacaacacaggtatgctctgtgtgtgtgtgtttgtgtgtatataccacaggccacacatc 159
Query: 301 aactgtgggtcttatccccctagcatcatctgccttgtttttggagacagagtctttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aactgtgggtcttatccccctagcatcatctgccttgtttttggagacagagtctttcac 99
Query: 361 tggcttggggctcgctgattt 381
|||||||||||||||||||||
Sbjct: 98 tggcttggggctcgctgattt 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
