Query= MSMg01no425_f12.b1 MSMg01no425_f12.b1 CHROMAT_FILE:
MSMg01no425_f12.b1 PHD_FILE: MSMg01no425_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:32 2005
(537 letters)
>mm_chr8_109248525_109249461
Length = 937
Score = 942 bits (487), Expect = 0.0
Identities = 493/495 (99%)
Strand = Plus / Minus
Query: 42 tttaaccagaattccaagaaacagggaaagggtgatatcaaactgcactctaaacttctg 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 tttaaccagaattccaagaaacagggaaagggtgatatcaaactgcactctaaacttctg 878
Query: 102 tttttgagacagggtctcagtacatagccctggctggcctggaatttactttgtagacaa 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 tttttgagacagggtctcagtacatagccctggctggcctggaatttactttgtagacaa 818
Query: 162 ggttggcctctcactcacagagatttgcctacttctgcccccaagtactaggattaaagg 221
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gattggcctctcactcacagagatttgcctacttctgcccccaagtactaggattaaagg 758
Query: 222 tatgcaccgccatgcccagttaaggaacattaaaaaaaaaaattgtaaaggaactaatat 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 757 tatgcaccgccatgcccagttaaggaacattaaaaaaaaaaattgtaaaggaactaaaat 698
Query: 282 accagcaggctggatccaggtgcgacagccactcacctgagtgacgtgtgtgaatatctg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 accagcaggctggatccaggtgcgacagccactcacctgagtgacgtgtgtgaatatctg 638
Query: 342 ctcagacatcttctcacacagaacggccagcagctgcagaacctgcagcttccgctcctg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ctcagacatcttctcacacagaacggccagcagctgcagaacctgcagcttccgctcctg 578
Query: 402 gtcttctatgagcagagtctggtggtgctctaactcaaggaggctcgcatagcaggaggg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtcttctatgagcagagtctggtggtgctctaactcaaggaggctcgcatagcaggaggg 518
Query: 462 cttgggagtgaactctgcttctctgtcctccagcaggtgagacaactcctaaagcaggaa 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cttgggagtgaactctgcttctctgtcctccagcaggtgagacaactcctaaagcaggaa 458
Query: 522 gagagaggcagaggc 536
|||||||||||||||
Sbjct: 457 gagagaggcagaggc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_f12.g1 MSMg01no425_f12.g1 CHROMAT_FILE:
MSMg01no425_f12.g1 PHD_FILE: MSMg01no425_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:32 2005
(434 letters)
>mm_chr8_109080610_109081443
Length = 834
Score = 793 bits (410), Expect = 0.0
Identities = 428/434 (98%), Gaps = 1/434 (0%)
Strand = Plus / Plus
Query: 1 acttaattgagttggttatattaaattagaacgttcctgaccgtgcccgggcaagagagc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 acttaattgagttggttatattaaattagaacgttcctgaccatgcccgggcaagagagc 260
Query: 61 ctaagacagaatgatgtctttgaagtgaagcccaaaatttttcttttgttagcaattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctaagacagaatgatgtctttgaagtgaagcccaaaatttttcttttgttaacaattttc 320
Query: 121 tattgttttatgtatgtgggtgttttccctgcatggacatctctgtaccacgtgtatacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgttttatgtatgtgggtgttttccctgcatggacatctctgtaccacgtgtatacc 380
Query: 181 tggtgcaccttttgcccaaggaggcaatagaagaaagtgttggatccccggacctggggt 240
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tggtgctccttttgcccaaggaggcaatagaagaaagtgttggatccccggacctggg-t 439
Query: 241 tatagagtgttacaagttgccctatgggtgctggaaatcaaacccaggtcctcctgaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatagagtgttacaagttgccctatgggtgctggaaatcaaacccaggtcctcctgaaga 499
Query: 301 gaagtcagcattctttaccatttagccatctctctccaggcccacaaaattgttcttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagtcagcattctttaccatttagccatctctctccaggcccacaaaattgttcttttc 559
Query: 361 agaaaatacagagtatttttcaagatttatttattacatgtaagtacactgtagctgtcc 420
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 560 aaaaaatacagagtatttttcaagatttatttattatatgtaagtacactgtagctgtcc 619
Query: 421 tcagatactccaga 434
||||||||||||||
Sbjct: 620 tcagatactccaga 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
