Query= MSMg01no426_b13.b1 MSMg01no426_b13.b1 CHROMAT_FILE:
MSMg01no426_b13.b1 PHD_FILE: MSMg01no426_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:29 2005
(241 letters)
>mm_chr8_113188867_113189507
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 236/237 (99%)
Strand = Plus / Minus
Query: 5 gaattctcttattctcgaaagtctaatatcaaatggcaaatgaatgcaaattacacttca 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaattctcttattctagaaagtctaatatcaaatggcaaatgaatgcaaattacacttca 382
Query: 65 attgcacaattaaagccggaaatgctgtctacaggttcctttggtgatcccagccactct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgcacaattaaagccggaaatgctgtctacaggttcctttggtgatcccagccactct 322
Query: 125 tcctgtgcttacaaagcaaatgatttgtttctagtcctagggattggcaaaaagcccaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgtgcttacaaagcaaatgatttgtttctagtcctagggattggcaaaaagcccaca 262
Query: 185 gccctgcctggggcaccatacatacacaggtgcacacacaatgaactgacccttcct 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccctgcctggggcaccatacatacacaggtgcacacacaatgaactgacccttcct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_b13.g1 MSMg01no426_b13.g1 CHROMAT_FILE:
MSMg01no426_b13.g1 PHD_FILE: MSMg01no426_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:30 2005
(455 letters)
>mm_chr8_112988405_112989259
Length = 855
Score = 820 bits (424), Expect = 0.0
Identities = 448/456 (98%), Gaps = 2/456 (0%)
Strand = Plus / Plus
Query: 1 actttcaataggtttccaggtagcatttccatacatacttggttcctcttcttccttact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttcaataggtttccaggtagcatttccatacatacttggttcctcttcttccttact 260
Query: 61 cccatccctagtctccctgcctttctgtctacttaatctacattgatggtttggttgcga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 cccatccctagtctccctgcctttctgtctacttaatctacatagatggtttggttgcga 320
Query: 121 tgggggggg-acgtgctatgcagaagctttttccccccccttcatatagtcagtcccttt 179
||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 tggggggggaacatgctatgcagaagcttttt-cccccccttcatatagtcagtcccttt 379
Query: 180 gtcagttctcagagcagttgcctgtgctagtaggtgtccattcagaaatctgtaacctag 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 gtcagttctcagagcagttgcctgtgctagtaggtgtccgttcagaaatctgtaacctag 439
Query: 240 acccatgcctgttctgtcactgtctcaagcttcaaattaacatctctgatccagcttgaa 299
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 acccatgcctgtactgtcactgtctcaagcttcaaattaacatctctgctccagcttgaa 499
Query: 300 ctgatttctgtacaggatgcgacatggatctaattcccctcttctgcgggcatctgtggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgatttctgtacaggatgcgacatggatctaattcccctcttctgcgggcatctgtggt 559
Query: 360 ttctaagatagtctctcactagcctggagcttttcaaagaagctaggctgactggccagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttctaagatagtctctcactagcctggagcttttcaaagaagctaggctgactggccagt 619
Query: 420 gagcctctggaatgtgccaccttccctatgctggga 455
||||||||||||||||| ||||||||||||||||||
Sbjct: 620 gagcctctggaatgtgctaccttccctatgctggga 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
