Query= MSMg01no426_n02.b1 MSMg01no426_n02.b1 CHROMAT_FILE:
MSMg01no426_n02.b1 PHD_FILE: MSMg01no426_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:29 2005
(557 letters)
>mm_chr8_16765539_16766493
Length = 955
Score = 944 bits (488), Expect = 0.0
Identities = 537/554 (96%), Gaps = 4/554 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcctgtgtaacagtgactcggtttccattttgtacagcaccagtgaacgttat 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 755 gaattcagcctgtgtaaaagtgactcggtttccattttgtacagcaccagtgaacggtat 696
Query: 65 aacagtattagcagcttgtgaattcattaaaccataaagggcattctcatgttctgtaca 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 695 aacagtattagcagcttgtgaattcattaaaccataaagggcattctcgtgttctgtaca 636
Query: 125 cataaaaatttataatgataagagccatcttaatgatcataattacaatctacttttatc 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cataaaaatttataatgacaagagccatcttaatgatcataattacaatctacttttatc 576
Query: 185 gatagctcatctcatttcaatgattgaaaatgtttatgtaaacattattctctttgttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gatagctcatctcatttcaatgattgaaaatgtttatgtaaacattattctctttgttaa 516
Query: 245 taagaaaacataagcactacatttttaagcagcctaggttggtgagacttaaagactctg 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 515 taagaaaacataagcactacatttttatgcagcctaggttggtgagacttaaagactctg 456
Query: 305 tagagatggtgccacagaggaagcctgtgtgttgagtggacctcaggacaaacttggcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tagagatggtgccacagaggaagcctgtgtgttgagtggacctcaggacaaacttggcat 396
Query: 365 tcttaagagtcattcaataggcagagtaacagtcattcaaatagtactcttagttgtcac 424
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 395 tcttaagagtcattcaataggcagagtaacagtcattcaaataatactcttaattgtcac 336
Query: 425 agtagtaggcaatccttatcaacagcaaatctcattgtagtgattaaaattgtgtcagct 484
|||||||||||||||||||||||||||||||||||||||||||||||| |||| || |
Sbjct: 335 agtagtaggcaatccttatcaacagcaaatctcattgtagtgattaaagttgt--caaat 278
Query: 485 gcattcttctcgtt-tattgaaaaggacatgaagttctaaaaatctaaggttcttatcaa 543
||||||||||| || |||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 277 gcattcttctc-ttctattgataaggacatgaagttctaaaactttaaggttcttatcaa 219
Query: 544 tggttccatgccca 557
||||||||||||||
Sbjct: 218 tggttccatgccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 955
Length adjustment: 10
Effective length of query: 547
Effective length of database: 945
Effective search space: 516915
Effective search space used: 516915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_n02.g1 MSMg01no426_n02.g1 CHROMAT_FILE:
MSMg01no426_n02.g1 PHD_FILE: MSMg01no426_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:29 2005
(563 letters)
>mm_chr8_16624226_16625188
Length = 963
Score = 1042 bits (539), Expect = 0.0
Identities = 554/559 (99%)
Strand = Plus / Plus
Query: 1 caaataattggaattaaaggccagccagcttgaggaaatgcttcgtagatgtcactggga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaataattggaattagaggccagccagcttgaggaaatgcttcgtagatgtcactggga 260
Query: 61 cgtggctgtcatgtaagtcttaggttgcacttgtgacagctgcagggatggttatttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 261 cgtggctgtcatgtaagtcttaggttgcacttgtgacagctgcagggatagatatttttc 320
Query: 121 tggttagtaagctggaggctgctgcatagggcatcaaggtactcaaccaggtcttcctaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 321 tggttagtaagctggaggctgctgcatagggcatcaaggttctcaaccaggtcttcccaa 380
Query: 181 ttctgaaacccatggtagcttctcactgcaccttgctcctgtgacttgattaatccaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgaaacccatggtagcttctcactgcaccttgctcctgtgacttgattaatccaatc 440
Query: 241 tctctcagtcattagctatgagatatgggaatatcacttacttgtacaatctttacttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctctcagtcattagctatgagatatgggaatatcacttacttgtacaatctttacttct 500
Query: 301 cattgcaaatcgatacaatgttgctttaacaaaggccagttgctaatataactgacaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattgcaaatcgatacaatgttgctttaacaaaggccagttgctaatataactgacaatt 560
Query: 361 tgctaaagtatcagaatgctaatacttcatcattttaacctgaaatacttgaatgttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctaaagtatcagaatgctaatacttcatcattttaacctgaaatacttgaatgttgtt 620
Query: 421 aggagagttagataactcagaggcagctttgggaaagcattagatacctgtgggcacagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggagagttagataactcagaggcagctttgggaaagcattagatacctgtgggcacagg 680
Query: 481 tccttcttcatgctatgacaatgaaggcatgattgctccatgacagtactggaaaaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccttcttcatgctatgacaatgaaggcatgattgctccatgacagtactggaaaaggaa 740
Query: 541 agaatctgcccaaggcgca 559
|||||||||||||||||||
Sbjct: 741 agaatctgcccaaggcgca 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
