NNNTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTTATCTCTGAACACCATTTTTAATGGGGTTATT
TGAATTTCTGGAGTTCAGCTTCTTGAGCTCTTTGTATATATTGGATATTA
GTCCCCTATCAGATTTAGGATTGGTAAAAATTCTTTCCCAATCTCTTGGT
GGCCTTTTTGTTTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAA
TTTTATGAGGTCCCATTTTTCGATTCTTGATCTTACAGCACAGGCCATTG
CTGTTCTGTTTAGGAATTTTTCCCCTCTTCGAGGGTTTCCCCCACTTTCT
CCTCTATAAATTTCAGTGTCTCTGGTTTTATGTGGAGGTCTTTGATCCAC
TTAGACTTGAGCTTTGTAAAAGAAGATAAGAATGGATCAATTGGCATTCT
TCTACATGATAACCGCCAGTTGTGCCAGTACCATTTGTTGAAAATGCTGT
CTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAATATCAAGTGACCA
AGTATGTGGGTTCATTTCTGGGNCTTTCATTCTATTCTATTGATCTACCT
ATCTGGTGCTGTACCAGTACCATGCAGGTTTTATCAACATTGCTCTGTAG
AACAACTTTTGGCCGGGCAGGGGGATTTCCCCCGAAGTTCTTTTGTTGGG
TTTGCTATCCCAAGATTTTTTTTTTTGGGGGGGGAATCCCAAAGAAATTT
TCAAATGCCCCTTA

NNTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATTGATCTGACTCC
AACCATCCCTATTCTCTCCCACACTTCCGGCTAATTCTGAAGATTAAGTC
TTGGCTGTACTCTACTGAGTTACCAAGAAAGCAAGCTCTGTCTCAAACAT
TAATGACATCAAGAGTGCCCCCACTAAGGAAAACGTAATAAAAGTGGGTG
CAATCAGCAGCGCTGAACCCAGGGTGGCGCTAAGCAGAGGTACACAGGCA
CATGTGAAGCAAGTCTTACAAAATGGGCCGATAATTGCAGTGCTCAGATT
CTGAGCTCCTTAAATACAAAGGATTATGTTCTCACACCTTGCAGGATGAA
TGATAATTTACCAGCAAAGAGAGACATAGTAGACCTGTCACAGGCAGATT
CTGTAATAATCGGGGCTGCATTTGCAGGAGAATCAAAGTTCCACATTGTC
AGTTTCTGCTTTTCTAGTTAAATTAACTTCTCCAGCAGTACACTCTGCAG
GGAGGAAATGAAGGAAGATGNNGNGGGGNNGGAAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNN

Query= MSMg01no427_b24.g1 MSMg01no427_b24.g1 CHROMAT_FILE:
MSMg01no427_b24.g1 PHD_FILE: MSMg01no427_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:54 2005
         (475 letters)



>mm_chr8_31732110_31732984
          Length = 875

 Score =  919 bits (475), Expect = 0.0
 Identities = 475/475 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaattgatctgactccaaccatccctattctctcccacacttccggctaattctgaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattgatctgactccaaccatccctattctctcccacacttccggctaattctgaagat 260

                                                                       
Query: 61  taagtcttggctgtactctactgagttaccaagaaagcaagctctgtctcaaacattaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagtcttggctgtactctactgagttaccaagaaagcaagctctgtctcaaacattaat 320

                                                                       
Query: 121 gacatcaagagtgcccccactaaggaaaacgtaataaaagtgggtgcaatcagcagcgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacatcaagagtgcccccactaaggaaaacgtaataaaagtgggtgcaatcagcagcgct 380

                                                                       
Query: 181 gaacccagggtggcgctaagcagaggtacacaggcacatgtgaagcaagtcttacaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacccagggtggcgctaagcagaggtacacaggcacatgtgaagcaagtcttacaaaat 440

                                                                       
Query: 241 gggccgataattgcagtgctcagattctgagctccttaaatacaaaggattatgttctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggccgataattgcagtgctcagattctgagctccttaaatacaaaggattatgttctca 500

                                                                       
Query: 301 caccttgcaggatgaatgataatttaccagcaaagagagacatagtagacctgtcacagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccttgcaggatgaatgataatttaccagcaaagagagacatagtagacctgtcacagg 560

                                                                       
Query: 361 cagattctgtaataatcggggctgcatttgcaggagaatcaaagttccacattgtcagtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagattctgtaataatcggggctgcatttgcaggagaatcaaagttccacattgtcagtt 620

                                                                  
Query: 421 tctgcttttctagttaaattaacttctccagcagtacactctgcagggaggaaat 475
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgcttttctagttaaattaacttctccagcagtacactctgcagggaggaaat 675


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space:   402225
Effective search space used:   402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)