Query= MSMg01no428_h10.b1 MSMg01no428_h10.b1 CHROMAT_FILE:
MSMg01no428_h10.b1 PHD_FILE: MSMg01no428_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:39 2005
(417 letters)
>mm_chr8_9795602_9796419
Length = 818
Score = 700 bits (362), Expect = 0.0
Identities = 406/432 (93%), Gaps = 19/432 (4%)
Strand = Plus / Plus
Query: 5 gaattctgctatctc-cagttgaaattatacactgaaggttttatctgccccagcatcca 63
||||||||||| | | ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctgctaccacacagttgaaattatacactgaaggttttgtctgccccagcatcca 264
Query: 64 ataacttggaagcacacacgtgggccatgattcatggctaagacagaaaatgttctgaga 123
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 ataacttggaagcacacacgtgggccgtgattcatggctaagacagaaaatgttctgaga 324
Query: 124 ggaactggcagccatcagcacctgggcctccagatatacttttagtgaaacatctgctct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaactggcagccatcagcacctgggcctccagatatacttttagtgaaacatctgctct 384
Query: 184 ggtgcagggctctgcgtcacggagaagcctgcaactaaggtgttccatacttagctttta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgcagggctctgcgtcacggagaagcctgcaactaaggtgttccatacttagctttta 444
Query: 244 ataacaagtctataaatgcattactgtcttgtctgcgcgtacacacacacacacacacac 303
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 445 ataacaagtctataaatgcatcactgtcctgtctgcgcgtacacacacacacacacacac 504
Query: 304 aca------------------tgcatacttgtttaaggggagtttttacattagacttgg 345
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acacacacacacacacacacatgcatacttgtttaaggggagtttttacattagacttgg 564
Query: 346 taatgtggaagcatggtatgctggctaatttgatgccaacttgacacaggctagagttat 405
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 taatgtggaagcatggtatgctggctaatttgatgtcaacttgacacaggctagagttat 624
Query: 406 ctgaaaggaagg 417
||||||||||||
Sbjct: 625 ctgaaaggaagg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 818
Length adjustment: 9
Effective length of query: 408
Effective length of database: 809
Effective search space: 330072
Effective search space used: 330072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_h10.g1 MSMg01no428_h10.g1 CHROMAT_FILE:
MSMg01no428_h10.g1 PHD_FILE: MSMg01no428_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:39 2005
(259 letters)
>mm_chr8_9924200_9924858
Length = 659
Score = 493 bits (255), Expect = e-144
Identities = 258/259 (99%)
Strand = Plus / Minus
Query: 1 tggttccatacttggcaattaaggctttttattttaacatcttgttttcagccttggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tggttccatacttggcaattaaggctttttattttaacatcttgttttcagccttggtca 400
Query: 61 gagtttcatcaagtccatgagtccttgtgtcttgtgtccctgcttcagtgactagaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gagtttcatcaagtccatgagtccttgtgtcttgtgtccctgcttcagtgactagaagta 340
Query: 121 ggtagtacttatacagtcttatacagtctctgtgggtgaggaccacacaggacaagtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggtagtacttatacagtcttatacagtctctgtgggtgaggaccacacaggacaagtgtt 280
Query: 181 aacaggtggatcatttcaggggctgtgattattttcattcttctctcaggctgattcttt 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aacaggtggatcctttcaggggctgtgattattttcattcttctctcaggctgattcttt 220
Query: 241 tttgggttgttttaaagta 259
|||||||||||||||||||
Sbjct: 219 tttgggttgttttaaagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 659
Length adjustment: 9
Effective length of query: 250
Effective length of database: 650
Effective search space: 162500
Effective search space used: 162500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
