Query= MSMg01no429_b08.b1 MSMg01no429_b08.b1 CHROMAT_FILE:
MSMg01no429_b08.b1 PHD_FILE: MSMg01no429_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:27 2005
(684 letters)
>mm_chr8_84050683_84051767
Length = 1085
Score = 1297 bits (671), Expect = 0.0
Identities = 679/682 (99%), Gaps = 1/682 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttgcct-gtaattaccttgaatattctgtctgtaggaaaaatgtaaagagaag 62
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgccaagtaattaccttgaatattctgtctgtaggaaaaatgtaaagagaag 263
Query: 63 tggaaattggtaaaattaattaatttcttgcaaaatcactttccacatcattagaacatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggaaattggtaaaattaattaatttcttgcaaaatcactttccacatcattagaacatt 323
Query: 123 tgttttcaaatgtcagaggcagataaaatcttttttgcagcatacccttcttcaagtgag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttttcaaatgtcagaggcagataaaatcttttttgcagcatacccttcttcaagtgag 383
Query: 183 ctgaagcccacagaatacaatggtagacatgtagcatctcagagactcagacagacaaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgaagcccacagaatacaatggtagacatgtagcatctcagagactcagacagacaaaa 443
Query: 243 ttgccctcagaacagaaaactgctgtgctttttatgatctttagagttgttggtgcatgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgccctcagaacagaaaactgctgtgctttttatgatctttagagttgttggtgcatgg 503
Query: 303 acttaggataaatatgagcagacatcgagaagcatagacaacaggcttgccagctatact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acttaggataaatatgagcagacatcgagaagcatagacaacaggcttgccagctatact 563
Query: 363 ccttacagactgaaacattaaaatcctacacaataaaatttgttacattaaattccaagt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccttacagactgaaacattaaaatcctacacaataaaatttgttacattaaattccaagt 623
Query: 423 aattgtgagacatgttactagaaaccgtggtagtaaatgtgactacatctctgctttctg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aattgtgagacatgttactagaaaccgtggtagtaaatgtgactacatctctgctttctg 683
Query: 483 ttatatgaccttcttttcataattccctctcattattaatcatttttattattttgttat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttatatgaccttcttttcataattccctctcattattaatcatttttattattttgttat 743
Query: 543 tttaatttctagcatcagaagaaaacaactttagggagcctttttgtccttcccctctct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttaatttctagcatcagaagaaaacaactttagggagcctttttgtccttcccctctct 803
Query: 603 gcaccctctgctccttccctctcttctcctttctccctctggnctcttcctctccctctc 662
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 804 gcaccctctgctccttccctctcttctcctttctccctctggtctcttcctctccctctc 863
Query: 663 tccactctttctacttttgacc 684
||||||||||||||||||||||
Sbjct: 864 tccactctttctacttttgacc 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1085
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1075
Effective search space: 724550
Effective search space used: 724550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_b08.g1 MSMg01no429_b08.g1 CHROMAT_FILE:
MSMg01no429_b08.g1 PHD_FILE: MSMg01no429_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:27 2005
(410 letters)
>mm_chr8_84217391_84218200
Length = 810
Score = 758 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Minus
Query: 18 cttgctagctacaccaaatagtgctgtttgcgcatccgtataaatatattcatgaatata 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 cttgctagctacaccaaatagtgctgtttgcgcatccgtataaatatattcatgaatata 751
Query: 78 tgaatgcaagtctactagctctgtttattaacagaattgctgatcacagaataaacacat 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgaatgcaagtctactagctctgtttattaacagaattgctgatcacagaataaacacat 691
Query: 138 gtacacttgagtatttattgtgaaatatgtttccaaagcaggtttctaatttgcatttcc 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtacacttgagtatttattgtgaaatatgtttccaaagcaggtttctaatttgcatttcc 631
Query: 198 accatggctatgggaaagtttgcattcacatacatttaatgagctcaaagtcttaatatt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 accatggctatgggaaagtttgcattcacatacatttaatgagctcaaagtcttaatatt 571
Query: 258 cctggttctctgaacttttttttcttaccccactttgaattggagtattgttttcctatt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cctggttctctgaacttttttttcttaccccactttgaattggagtattgttttcctatt 511
Query: 318 gttttccataagccttcaatgaagtaaagagagcacctctgctatttgtaaagcaaatgc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gttttccataagccttcaatgaagtaaagagagcacctctgctatttgtaaagcaaatgc 451
Query: 378 atgactgtgccttttggttttgtttgtttgtg 409
||||||||||||||||||||||||||||||||
Sbjct: 450 atgactgtgccttttggttttgtttgtttgtg 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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