Query= MSMg01no429_m01.b1 MSMg01no429_m01.b1 CHROMAT_FILE:
MSMg01no429_m01.b1 PHD_FILE: MSMg01no429_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:20 2005
(597 letters)
>mm_chr8_60064066_60065060
Length = 995
Score = 1075 bits (556), Expect = 0.0
Identities = 578/586 (98%), Gaps = 2/586 (0%)
Strand = Plus / Plus
Query: 12 gaattcaaaatctatttttttttaaaaaaaatgatcagtttatttcagtagtatcacagt 71
|||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 212 gaattcaaaatcaattttttt--aaaaaaaatgatcagtttatttcagaagtatcacagt 269
Query: 72 atctaataagatacagatccagtaggcacacaatgaaaatcaccatttcctgcttttcct 131
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atctaataagatacagatccaataggcacacaatgaaaatcaccatttcctgcttttcct 329
Query: 132 tctgtcgaggcagtcgtagctaccaattgattatgaatttcccctgagacatatatgaac 191
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctgccgaggcagtcgtagctaccaattgattatgaatttcccctgagacatatatgaac 389
Query: 192 aaatgaaaacaaaatataatccctcttatactagcatacagatacacaaaattgccacag 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaatgaaaacaaaatataatccctcttatactagcatacagatacacaaaattgccacag 449
Query: 252 tgaaacccatttctgttgtacatgaacttaaaatcagaagtaaataacttgacagtcatc 311
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 450 tgaaacccatttctgttgtatatgaatttaaaatcagaagtaaataacttgacagtcatc 509
Query: 312 atactaaaaaggttcacaaaggactggagagtccctcgggattaactgaccataagaaac 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atactaaaaaggttcacaaaggactggagagtccctcgggattaactgaccataagaaac 569
Query: 372 gtgcaccctaaatacaactaactctgcaacagagggacaagcattgaagccaaggtgtgg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtgcaccctaaatacaactaactctgcaacagagggacaagcattgaagccaaggtgtgg 629
Query: 432 cttgttacatgttacatattattagacattacagcctggggtgctttccaaactccacat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cttgttacatgttacatattattagacattacagcctggggtgctttccaaactccacat 689
Query: 492 gcccagaccagttaaatcccagtgcccaagagcagggcactttagtattcttcaaggtcc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gcccagaccagttaaatcccagtgcccaagagcagggcactttagtattcttcaaggtcc 749
Query: 552 cctgagaggggcccatgttgagaaacactgctttgtgaaacagaat 597
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 cctgagaggggcccatgttgagaaacactgctttgtgaaacagaat 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 995
Length adjustment: 10
Effective length of query: 587
Effective length of database: 985
Effective search space: 578195
Effective search space used: 578195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_m01.g1 MSMg01no429_m01.g1 CHROMAT_FILE:
MSMg01no429_m01.g1 PHD_FILE: MSMg01no429_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:20 2005
(593 letters)
>mm_chr8_60199473_60200465
Length = 993
Score = 816 bits (422), Expect = 0.0
Identities = 431/434 (99%)
Strand = Plus / Minus
Query: 1 catttgttcttgcttttgtggatagagttaatcatgccctatgcagctctgtttatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 catttgttcttgcttttgtggatagagttaatcatgccctatgcagctctgtttatatgt 375
Query: 61 cttatagcacaaaacacgtggctttatgcccagcagtttgagggcttcaccctggttacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cttatagcacaaaacacgtggctttatgcccagcagtttgagggcttcaccctggttacg 315
Query: 121 aatgcatactccaggagacattgtgacctctggaatttattggcatatctcagcaccttg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 314 aatgcatactacaggagacattgtgacctctggaatttattggcatatctcaggaccttg 255
Query: 181 tttatatttccactctaaaatatatgcacagttattttaaaagaatgatgaataggagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttatatttccactctaaaatatatgcacagttattttaaaagaatgatgaataggagct 195
Query: 241 ggagaggtggctaagcagttacgacccagcactgtacttgcaaaaatcccaagtttggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggagaggtggctaagcagttacgacccagcactgtacttgcaaaaatcccaagtttggtt 135
Query: 301 ggcggcacccacatctggcgtctctaactgcttctaatttcatctttatggtatccaagg 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ggcggcacccacatctggcatctctaactgcttctaatttcatctttatggtatccaagg 75
Query: 361 cctctggcctctgtgtgcatctgtattcatttgagcatgcctaaactcaggccccaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cctctggcctctgtgtgcatctgtattcatttgagcatgcctaaactcaggccccaacac 15
Query: 421 atacacaaaattaa 434
||||||||||||||
Sbjct: 14 atacacaaaattaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
