Query= MSMg01no430_a03.b1 MSMg01no430_a03.b1 CHROMAT_FILE:
MSMg01no430_a03.b1 PHD_FILE: MSMg01no430_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:39 2005
(445 letters)
>mm_chr8_101459301_101460145
Length = 845
Score = 799 bits (413), Expect = 0.0
Identities = 438/453 (96%), Gaps = 12/453 (2%)
Strand = Plus / Minus
Query: 5 gaattccttatatatgtagatatttcaatgactcgatacactttgaatacctagtctttt 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaattccttagatatgtagatatttcaatgactcgatacactttgaatacctagtctttt 724
Query: 65 ttcaaattgtcattcac----------acacacacacacacacacacacacacacacaca 114
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 723 ttcaaattgtcattcacacacacacaaacacacacacacacacacacacacacacacaca 664
Query: 115 cacacac--gcacacacaagttttaactgggtatgtctatctctcataggggaattctta 172
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cacacacatgcacacacaagttttaactgggtatgtctatctctcataggggaattctta 604
Query: 173 aatcaactctatagactcttggataacccttcttaggcctggagcagaggtttctctatt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 603 aatcaactctatagactcttggataacccttcttaggcctggagcagaggtttctgtatt 544
Query: 233 tgcagtctattgttaatatcttgtctgaccatgtgctattcttaatttatttggttagtc 292
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 543 tgcagtctattgttaatatcttgtctgaccatgtgttattcttaatttatttggttagtc 484
Query: 293 agcaaaattattaaagtatatttattggtctttaaaatagaagaacaggaattgtacaaa 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agcaaaattattaaagtatatttattggtctttaaaatagaagaacaggaattgtacaaa 424
Query: 353 tggcctaaaatttctctgatctcactaggttaaataagcattgtcaataaagggccaaca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tggcctaaaatttctctgatctcactaggttaaataagcattgtcaataaagggccaaca 364
Query: 413 tggctgttcttgaagtgcaccactctctattca 445
|||||||||||||||||||||||||||||||||
Sbjct: 363 tggctgttcttgaagtgcaccactctctattca 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 16
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_a03.g1 MSMg01no430_a03.g1 CHROMAT_FILE:
MSMg01no430_a03.g1 PHD_FILE: MSMg01no430_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:39 2005
(452 letters)
>mm_chr8_101292597_101293448
Length = 852
Score = 795 bits (411), Expect = 0.0
Identities = 437/447 (97%), Gaps = 5/447 (1%)
Strand = Plus / Plus
Query: 7 acacactaaacacacacacacacacacacacacacacacacac-accaagacacaacagg 65
|||||| |||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 210 acacac---acacacacacacacacacacacacacacacacaccac-aagacacaacagt 265
Query: 66 aacaaaacccaagttctgcagttggaagagtaagtcttcattttatctagataaaaatca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aacaaaacccaagttctgcagttggaagagtaagtcttcattttatctagataaaaatca 325
Query: 126 ggttattaatcaacaatatatatgtgttccccctttagaaagattattgaaattttcctt 185
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 326 ggttattaatcaacaatatatatgtgttccccctttagaaagatttttgaaattttcctt 385
Query: 186 gtggctctacgggtgtaaatagacaagcatggaagtattttcacattgaaaaacgtcatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtggctctacgggtgtaaatagacaagcatggaagtattttcacattgaaaaacgtcatt 445
Query: 246 gctttttagagtctaacagtcatagttatgtgttaaagctaacacacatactattttcaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gctttttagagtctaacagtcatagttatgtgttaaagctaacacacatactattttcaa 505
Query: 306 tgattcaaagagttgaagtgatgtacccagctatactttagtgatcataccacatatatg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgattcaaagagttgaagtgatgtacccagctatactttagtgatcataccacatatatg 565
Query: 366 cagtcatacagtaatagaagcttgcatagaaaggaagaatctgatatcttatttcaattt 425
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 566 cagtcatacagtaatagaagcttgcatagaaagggagaatctgataccttatttcaattt 625
Query: 426 gtccacctcatgctgctaatcttagag 452
|| ||||||||||||||||||||||||
Sbjct: 626 gttcacctcatgctgctaatcttagag 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
