Query= MSMg01no430_g16.b1 MSMg01no430_g16.b1 CHROMAT_FILE:
MSMg01no430_g16.b1 PHD_FILE: MSMg01no430_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:15 2005
(213 letters)
>mm_chr8_127905070_127905679
Length = 610
Score = 342 bits (177), Expect = 7e-99
Identities = 201/209 (96%), Gaps = 3/209 (1%)
Strand = Plus / Plus
Query: 4 ggaattccccaggattacccctaggtgggtggtaaccgaacactgcatgcattgggtgac 63
|||| ||||||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 204 ggaa-tccccagga-gacccctaggtgggtggtaaccgaacattgcattcattgggtgac 261
Query: 64 tacctcaactgtactgagaggttttctgcagagccttgtatatggacctcgtatagagag 123
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 262 tacctcaactgtactgagaggttttctgcagagccttgtatat-gacctggtatagagag 320
Query: 124 gcactgggagaccaaagatgactccacccatgtcccacttggttgggttacttggggaaa 183
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gcactgggagaccaaagatgactccacccaagtcccacttggttgggttacttggggaaa 380
Query: 184 gcgagagtatgggtgggggattaggatgt 212
|||||||||||||||||||||||||||||
Sbjct: 381 gcgagagtatgggtgggggattaggatgt 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 610
Length adjustment: 9
Effective length of query: 204
Effective length of database: 601
Effective search space: 122604
Effective search space used: 122604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_g16.g1 MSMg01no430_g16.g1 CHROMAT_FILE:
MSMg01no430_g16.g1 PHD_FILE: MSMg01no430_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:15 2005
(288 letters)
>mm_chr8_127943338_127944025
Length = 688
Score = 507 bits (262), Expect = e-148
Identities = 280/286 (97%)
Strand = Plus / Minus
Query: 1 ttagagacaggacacatggacagagtaaagagttaggggatgaactggaggctgttgaag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttagagacaggacacatggacagggtaaagagttaggggatgaactggaggctgttgaag 427
Query: 61 gatggaagtagacaccctgaggaggtgaggcgcgcccagtagttcagctgctcgcccgct 120
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 426 gatggaagtagacaccctgaggaggtgaggtgcgtccagtagttcagctgctcgcccgct 367
Query: 121 gaggggcacagcaggaacagtggctgctatgactgtcctgcccctcagctctccagagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaggggcacagcaggaacagtggctgctatgactgtcctgcccctcagctctccagagct 307
Query: 181 gaagcttgtcatgtagttctcatggtagaagcccctaaagcagttaattggaaagtccta 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 306 gaagcttgtcatgtagttctcatggtagaagcgcctaaagcagttaattggaaagtccca 247
Query: 241 gtgtgtagtcttgagaggcaaactttgaaggccagtgtggggctcc 286
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtgtgtggtcttgagaggcaaactttgaaggccagtgtggggctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
