Query= MSMg01no434_f07.b1 MSMg01no434_f07.b1 CHROMAT_FILE:
MSMg01no434_f07.b1 PHD_FILE: MSMg01no434_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:43 2005
(275 letters)
>mm_chr8_89252404_89253082
Length = 679
Score = 458 bits (237), Expect = e-133
Identities = 265/279 (94%), Gaps = 12/279 (4%)
Strand = Plus / Minus
Query: 5 gaattctcaggattac----actttgcctggctgtgtacttcccttcatccctgtatgta 60
||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaattctcagg---acaaagactttgcctggctgtgtacttcccttcatccctgtatgta 423
Query: 61 tgtttcctaccctgaagccttaagaaagcactgagatcgtgacctccggaaac--attct 118
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 422 tgtttcctaccctgaagccttaagaaagcactgagatcgtgacctctggaaacatattct 363
Query: 119 actagactcaactgctgccaagtgtacaggcttcaagttgctggtggcgccaggcagagc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actagactcaactgctgccaagtgtacaggcttcaagttgctggtggcgccaggcagagc 303
Query: 179 agctcaggtgggctgtagggtggggcttaaggcgaagtccgcc--ctctctctcggctct 236
||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
Sbjct: 302 agctcaggtgggctgtagggtggggcttaaggcgaagtccgccctctctctctcgact-t 244
Query: 237 gccctagcgcctgccaggtgttgaagactaagcagcagg 275
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gccctagcgcctgccaggtgttgaagactaagcagcagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 679
Length adjustment: 9
Effective length of query: 266
Effective length of database: 670
Effective search space: 178220
Effective search space used: 178220
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no434_f07.g1 MSMg01no434_f07.g1 CHROMAT_FILE:
MSMg01no434_f07.g1 PHD_FILE: MSMg01no434_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:43 2005
(223 letters)
>mm_chr8_89062407_89063029
Length = 623
Score = 418 bits (216), Expect = e-121
Identities = 221/223 (99%)
Strand = Plus / Plus
Query: 1 cacccaccccaccccctcacttcatggaagcacagtgccaactgggaacagctctctctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 cacccaccccaccccctcacttcatggaagcacagtgccaactgagaacagctctctctg 260
Query: 61 actctgagtaaggggtgcctatcacatgactcccaattcctggtgcacagtccactattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actctgagtaaggggtgcctatcacatgactcccaattcctggtgcacagtccactattg 320
Query: 121 attgctaacaccgagatttggctttggttttgtttttgtggtttttgtttggttttggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgctaacaccgagatttggctttggttttgtttttgtggtttttgtttggttttggag 380
Query: 181 caggnaactttggaagaatgtacagtgaatagtgaaaaggaag 223
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggaactttggaagaatgtacagtgaatagtgaaaaggaag 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
