Query= MSMg01no435_e07.b1 MSMg01no435_e07.b1 CHROMAT_FILE:
MSMg01no435_e07.b1 PHD_FILE: MSMg01no435_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:56 2005
(419 letters)
>mm_chr8_11995937_11996754
Length = 818
Score = 745 bits (385), Expect = 0.0
Identities = 408/416 (98%), Gaps = 1/416 (0%)
Strand = Plus / Plus
Query: 4 gaattccttgatttccccagtgtctcacaaaatagaactctctctgtgtgtgttacccaa 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccttgattttcccagtgtctcacaaaatagaactctctctgtgtgtgttacccaa 263
Query: 64 gcattagagatggagtcccctctctgtaccccctttctacctagagtttgcatgttcaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcattagagatggagtcccctctctgtaccccctttctacctagagtttgcatgttcaca 323
Query: 124 aatatcacttcacatagtcctcactagaagcacacactgtcctgtctctgttctacaggt 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatatcacttcgcatagtcctcactagaagcacacactgtcctgtctctgttctacaggt 383
Query: 184 gaggagcgtgaggttggcggtgactcgcctgagttcatcccaggaagccatctctgtctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaggagcgtgaggttggcggtgactcgcctgagttcatcccaggaagccatctctgtctc 443
Query: 244 tcacaaagccctgtgtgagcaaaggttcacacaactggcacagccatgcagttgtggccc 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcacaaagccccgtgtgagcaaaggttcacacaactggcacagccatgcagttgtggccc 503
Query: 304 tgctgtaccttggaaaagatgcaagatacagcctgtgtgttttccaggatgcgatgttcc 363
|||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||
Sbjct: 504 tgctgtaccttggaaaagatgcaagacacagcctgtgtgttt-ccaggatgcgctgttcc 562
Query: 364 acacttgtgcttctgctgatgttggaggtgtgttanaagcttgtctcactagaaca 419
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 563 acactcgtgcttctgctgatgttggaggtgtgttagaagcttgtctcactagaaca 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_e07.g1 MSMg01no435_e07.g1 CHROMAT_FILE:
MSMg01no435_e07.g1 PHD_FILE: MSMg01no435_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:56 2005
(422 letters)
>mm_chr8_12180111_12180932
Length = 822
Score = 629 bits (325), Expect = 0.0
Identities = 349/357 (97%)
Strand = Plus / Minus
Query: 1 cacagaacgtgtaggggtaacaccacgcaactagtgaggattagtcgagaaccctgcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cacagaacgtgtaggggtaacaccacgcaactagtgaggattagtcgagaaccctgcgct 298
Query: 61 tgtttggtgcttgaagatcagctttcagaagtcactgccttgttcactcttcctgctgct 120
|||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgttcggtgcttgaagaccagccttcagaagtcactgccttgttcactcttcctgctgct 238
Query: 121 gtggtggaacaccttgagaaaagccatatcagaggaatcaagagtacagcccatcctggt 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gtggtggaacaccttgagagaagccatatcagaggaatcaagagtacagcccatcctggt 178
Query: 181 ggggaagtcaccgcagccagccaggtcacaccatgtccacaaccaagaagcagacagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ggggaagtcaccgcagccagccaggtcacaccatgtccacaaccaagaagcagacagcaa 118
Query: 241 tgaatatctgtgctcagcctagtttcctttttatactctccaatcgataaagtagaaagt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tgaagatctgtgctcagcctagtttcctttttatactctccaatcgataaagtagaaagt 58
Query: 301 aattgaagaggacacctacttcctatgttgggtctcaatacatacacacttaaactt 357
|||||||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 57 aattgaagaggacacctacttcctatgttgggcctcaatacacacgcacttaaactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
