Query= MSMg01no436_b18.b1 MSMg01no436_b18.b1 CHROMAT_FILE:
MSMg01no436_b18.b1 PHD_FILE: MSMg01no436_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:06 2005
(543 letters)
>mm_chr8_118514009_118514950
Length = 942
Score = 884 bits (457), Expect = 0.0
Identities = 513/543 (94%), Gaps = 19/543 (3%)
Strand = Plus / Plus
Query: 1 acagatctgtattttgtatagaggagatagaatctcttcttgctggtgttgctatttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagatctgtattttgtatagaggagatagaatctcttcttgctggtgttgctatttgag 260
Query: 61 atagccccaattgattaaagatagccttgaactcatggagctgagggctgccttgaactt 120
||||| ||||||||| |||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 261 gtagcctcaattgattcaagatagccttgaactcacggagctgagggcagccttgaactt 320
Query: 121 ctgatcctcctgcttctaacctcctgcatgctgggactacagatggacacacatatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgatcctcctgcttctaacctcctgcatgctgggactacagatggacacacatatatat 380
Query: 181 gatgctgggaagggagcttagggcttgctacagaataagcaagcactctacccgatgaac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gatgctgggaagggagcttagggcttgctacagaataggcaagcactctacccgatgaac 440
Query: 241 tatccacattccaaaaggagacattcatttctaagcatctttcagctttgtttataccaa 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtccacattccaaaaggagacattcatttctaagcatctttcagctttgtttataccaa 500
Query: 301 tgaaagatatttttgccaagtgaatgtcactctatttcatgtgcccttattatattaaaa 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 tgaaagatatttttgccaagtgaatgtcactctaattcatgtgcccttattatattaaaa 560
Query: 361 aatggtacatgtctgccctacatatgcagccactgtcatagactccttgctgtgtcaccc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 aatggtacatgtctgccctacatatgcagccactgtcatagactccttgctgtgacaccc 620
Query: 421 acagtaaaataagtcggtaaagaatgcttattttttataaagaaaggaccagttttcact 480
|||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 acagcaaaataagtcggtaaagaatgcttattttttaaaaagaaaggaccagttttcac- 679
Query: 481 atgaagaatatgaaagcctccatacagtgagcaaacatgagtaaagacctgccccttctc 540
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atga------------------tacagtgagcaaacatgagtaaagacctgccccttctc 721
Query: 541 tta 543
|||
Sbjct: 722 tta 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 942
Length adjustment: 10
Effective length of query: 533
Effective length of database: 932
Effective search space: 496756
Effective search space used: 496756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_b18.g1 MSMg01no436_b18.g1 CHROMAT_FILE:
MSMg01no436_b18.g1 PHD_FILE: MSMg01no436_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:06 2005
(464 letters)
>mm_chr8_118703737_118704600
Length = 864
Score = 398 bits (206), Expect = e-115
Identities = 212/214 (99%)
Strand = Plus / Minus
Query: 1 cctgggatttccagtgggaaaatcaggacagaaggacgttgggaggaagtggtcatgcta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 413 cctgggatttccagtgggaaaatcagcacagaaggacgttgggaggaagtggtcatgcta 354
Query: 61 gactattacccttggctctcaccagtcagtgagccaaagagttctcatttaacccatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gactattacccttggctctcaccagtcagtgagccaaagagttctcatttaacccatcct 294
Query: 121 ggaggttgggtccactgatgtggtctcttctctccttatttcaagttagaacaacattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggaggttgggtccactgatgtggtctcttctctccttatttcaagttagaacaacattag 234
Query: 181 tggcctccaaggccaagtaggagccaaggtgcct 214
|||||||||||||||| |||||||||||||||||
Sbjct: 233 tggcctccaaggccaactaggagccaaggtgcct 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
