Query= MSMg01no437_c18.b1 MSMg01no437_c18.b1 CHROMAT_FILE:
MSMg01no437_c18.b1 PHD_FILE: MSMg01no437_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:27 2005
(603 letters)
>mm_chr8_3395378_3396380
Length = 1003
Score = 915 bits (473), Expect = 0.0
Identities = 473/473 (100%)
Strand = Plus / Minus
Query: 131 ttctcatgcttacacaagtacccatactcatccagccattcctgcagccctgccatacat 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 ttctcatgcttacacaagtacccatactcatccagccattcctgcagccctgccatacat 944
Query: 191 gtctatagagctctgtattcctttctctgggttagacacttaatcctaggtttaacctca 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gtctatagagctctgtattcctttctctgggttagacacttaatcctaggtttaacctca 884
Query: 251 ggactgtcagaatcagtttttccaaagctagctgcaccattctaaatgtctagcagaagt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 ggactgtcagaatcagtttttccaaagctagctgcaccattctaaatgtctagcagaagt 824
Query: 311 atagaaggatctccaccttccagcctcccatctgcccctctcctttctcctctggctaga 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 atagaaggatctccaccttccagcctcccatctgcccctctcctttctcctctggctaga 764
Query: 371 aggatagaacacacagcctatacttgccaggcaaccactgcagaacagagccatgcccac 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aggatagaacacacagcctatacttgccaggcaaccactgcagaacagagccatgcccac 704
Query: 431 aagtccctgtccttcccaaaattcagttaacagttccatggattgcataatgaagatcac 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aagtccctgtccttcccaaaattcagttaacagttccatggattgcataatgaagatcac 644
Query: 491 agtgatccagtaactaccatacccacccctgtaagcaacacacacccttactgcagatac 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agtgatccagtaactaccatacccacccctgtaagcaacacacacccttactgcagatac 584
Query: 551 ccaacaaggctcaatggttttgctctacatctgcccactgatacaaaagtcac 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ccaacaaggctcaatggttttgctctacatctgcccactgatacaaaagtcac 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_c18.g1 MSMg01no437_c18.g1 CHROMAT_FILE:
MSMg01no437_c18.g1 PHD_FILE: MSMg01no437_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:27 2005
(484 letters)
>mm_chr8_3224548_3225431
Length = 884
Score = 915 bits (473), Expect = 0.0
Identities = 484/493 (98%), Gaps = 9/493 (1%)
Strand = Plus / Plus
Query: 1 ataatataatttctccatcttcccttttaccctacccatatcccaccagtccgccaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ataatataatttctccatcttcccttttaccctacccatatcccaccagtccgccaaagg 251
Query: 61 atccaggtccatcccaaaagatttgtcaggcaa---------attttttttaaatcccaa 111
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 252 atccaggtccatcccaaaagatttgtcaggcaacctaaaacaattttttttaaatcccaa 311
Query: 112 tagcaggtagtaaaatgactgtatttcacataggtacctttgtcggtgcctggaaatgtc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tagcaggtagtaaaatgactgtatttcacataggtacctttgtcggtgcctggaaatgtc 371
Query: 172 tgcaaggcctcccacacagtagcagaacactcaggattgaagaggggaaacgtggaatgc 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcaaggcctcccacacagtagcagaacactcaggattgaagaggggaaacgtggaatgc 431
Query: 232 ccaatgttcctctcagaaatcaagatttagaaaaccataatttgagggctcttgagcaca 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccaatgttcctctcagaaatcaagatttagaaaaccataatttgagggctcttgagcaca 491
Query: 292 ttcctccatgaggcctatgattgtgggataccaggggaattgggaacatgagcctagagt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttcctccatgaggcctatgattgtgggataccaggggaattgggaacatgagcctagagt 551
Query: 352 gaaatctgggctcacgactaaaatgagttttcttaaaagggggtaggaggcagctaagtc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaaatctgggctcacgactaaaatgagttttcttaaaagggggtaggaggcagctaagtc 611
Query: 412 agctcatacagacagaagttgaggggaggagcagttgctgaggttataaggaagttggaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agctcatacagacagaagttgaggggaggagcagttgctgaggttataaggaagttggaa 671
Query: 472 atcaagaaattct 484
|||||||||||||
Sbjct: 672 atcaagaaattct 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
