XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGGATCCGCGGAATTCTTGA
CACTAATCCTGGTGACATGAACCTAGTTGTAAGAACCTACCTGGTGCAAA
GAGAACACCCACTGGAACATATTGTAGCTCTGCTCTGATCTCCACATATA
TGCCGCAGGATGCACACACACACACACACACACACACACATACACACACG
CGCGCGCGCGCGCACACGCACACACACTTACACATAAATACACCTGCACT
CACCATACACATACAGACATACAGACACACACAATCACTCACACACCCTC
ACACACAAACACACTCACCACACACAGAAAGGCACAGACACACACAGAAA
CAGACATAAACACTGAATAAAAAATAAAAAATAAAAAAAATAAATAATAT
CTTTAAAAACTTACGACTCACTGCAGTCCAGTGTACCTTATATTCTTTCA
TGGGCCCCACTCCCTTTATCATGTCTAGATTTTCATTTCTACTTAGTGTC
TGTGTCCGTTCTCTGTTACTATAATGAGTACCTGAGATAATTAACTTATA
AAGGAAAAAGGGGCAAGCAGGGCCTATCATTCTGAAGATTTCAACCCATA
AGTAACTGGCTCGACTTCTGCGAGTTTAAGGTGAGGAAGATCATCGCATA
GGCACTGGATCATTCACTGCAAGGTCAGGATGCAAAGGATAGAGAAGAAG
GAGACCACTGTTACCCCAACCTCTCAGGGGAATTCCTTTCAGTGACTTTA
ATACCCCCAGAAAAACCAACTTCC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTAGTTGTTGTTTTTTGTTCGTTTGTTGGTTTTC
TTCTTTTTTTTTCTTTTCTTTCTTTCTTTTTTTTTTTGTGTGTGTGGGGG
GAGGGCGNNTNNCTTGNNGATNNTNNNTTTTTTTTTTTTTTTTTTTTTTT
TTGTTTTTTNNTTTTCTTTCGCTTTGTTTTGCTTTTTTGTTTTGTTTTTT
TTGCTCCCCTTCTCCCCCTCTCTCTTCCCCCCCCCCTCCCTCCTCCCGCC
CCCCCCCCCCTTTTTTTTTTTTTGCGCCGCCCGTTTCCCCCCGCCCCCCC
TTCGCCCCCCCCCCCCTCCTTCCCCCCCCCTCTTTCTCTTTCTTTCTTCT
TCTCCCCCCCCCCCCCCTCTTCTCTCGTCCCTCCTCCTTCCCCCCCTTCT
CTCCCTCCTTCTTCTTCTTCTCTTCTCCCCTTTTCCCTCCCCCTCCCTTT
CCCTCCTCTCATTACTCTCTTCTTCTCTCCCCTTCTTTCTTTCTTCCTTC
CTCTCTCCTCTTTCCTCCTTTCTTCCTTTCTTCTCCTTCCCCTCTTTTTT
CTCTCTCTCTTTTTCCTCCTCCCTCCTCTCCCCCCTTCTCTTCCTCCCCC
CCCTTTTTTTTCTTTTCCTCCCACCTCTTCCCTCCTCCCCTTCTTCCCTC
CTCCCTCTTCTCTCCCCTCTCCCTCTCCTCCCCCTTTCTTTTTCCTCTCC
CCCCCCTCCCTTTTTCTCCTCCTCTCTCCTCCTCTTTCCTCCCCCTCTCT
CCTCCCCCCCCCCTCCTCTTTCTTTG

Query= MSMg01no438_b12.b1 MSMg01no438_b12.b1 CHROMAT_FILE:
MSMg01no438_b12.b1 PHD_FILE: MSMg01no438_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:43 2005
         (591 letters)



>mm_chr8_30142082_30143071
          Length = 990

 Score =  835 bits (432), Expect = 0.0
 Identities = 531/592 (89%), Gaps = 52/592 (8%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattcttgacactaatcctggtgacatgaacctagttgtaagaacctacctggtgcaa 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggaattcttgacactaagcctggtgacatgaacctagttgtaagaacctacctggtgcaa 305

                                                                       
Query: 65  agagaacacccactggaacatattgtag-ctctgctctgatctccacatatatgccgcag 123
           |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 306 agagaaaacccactggaacatattgtagtctctgctctgatctccacatatatgctgcag 365

                                                                       
Query: 124 gatgcacacacacacacacacacac--acacacatacacacacgcgcgcgcgcgcgcaca 181
           |||||||||||||||||||||||||  |      |||||||                   
Sbjct: 366 gatgcacacacacacacacacacactta------tacacac------------------- 400

                                                                       
Query: 182 cgcacacacacttacacataaatacacctgcactcaccatacacatacagacatacagac 241
                      |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 -----------ttacacataaatacacctgcactcaccatacacatacagacatacagac 449

                                                                       
Query: 242 acacacaatcactcacacaccctcacacacaaacacactcaccacacacagaaaggcaca 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acacacaatcactcacacaccctcacacacaaacacactcaccacacacagaaaggcaca 509

                                                                       
Query: 302 gacacacacagaaacagacataaacactgaataaaaaataaaaaataaaaaaaataaata 361
           |||||||||||||||||||||||||||| ||||| |||||||   ||||     ||||||
Sbjct: 510 gacacacacagaaacagacataaacactaaataataaataaa---taaa-----taaata 561

                                                                       
Query: 362 atatctttaaaaacttacgactcactgcagtccagtgtaccttatattctttcatgggcc 421
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atatctttaaaaacttaggactcactgcagtccagtgtaccttatattctttcatgggcc 621

                                                                       
Query: 422 ccactccctttatcatgtctagattttcatttctacttagtgtctgtgtccgttctctgt 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 622 ccactccctttatcatgtctagattttcatttctacttagtgtctgtgtccattctctgt 681

                                                                       
Query: 482 tactataatgagtacctgagataattaacttataaaggaaaaagggg-caagcagggcct 540
           |||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||| |
Sbjct: 682 tactataatgagtacctga--taattaacttataaaggaaaaagggggcaagtagggctt 739

                                                               
Query: 541 atcattctgaagatttcaacccataagtaactggctcgactt-ctgcgagtt 591
           |||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 740 atcattctgaagatttcaacccataagtaactggctcg-ctttctgcgagtt 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 990
Length adjustment: 10
Effective length of query: 581
Effective length of database: 980
Effective search space:   569380
Effective search space used:   569380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)