Query= MSMg01no438_e10.b1 MSMg01no438_e10.b1 CHROMAT_FILE:
MSMg01no438_e10.b1 PHD_FILE: MSMg01no438_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:00 2005
(248 letters)
>mm_chr8_94652247_94652894
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 cttgaggaacactttttaaagatctatcaaagaatagtgctagtaacaaatgcagcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgaggaacactttttaaagatctatcaaagaatagtgctagtaacaaatgcagcacat 260
Query: 61 attgcctgccagacccggcactaagtacgttactaatgtctaacctgctgatttctaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgcctgccagacccggcactaagtacgttactaatgtctaacctgctgatttctaaag 320
Query: 121 gcttttttatttttatatgtgtgtgtgtgctcgtgcacatgcgctcttgagcgcatgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttttttatttttatatgtgtgtgtgtgctcgtgcacatgcgctcttgagcgcatgtgt 380
Query: 181 gtgcagatgccctaaagagcatagaagagagtgctggatccccctaagctggagttacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgcagatgccctaaagagcatagaagagagtgctggatccccctaagctggagttacag 440
Query: 241 gcagttgg 248
||||||||
Sbjct: 441 gcagttgg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no438_e10.g1 MSMg01no438_e10.g1 CHROMAT_FILE:
MSMg01no438_e10.g1 PHD_FILE: MSMg01no438_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:00 2005
(226 letters)
>mm_chr8_94819766_94820390
Length = 625
Score = 422 bits (218), Expect = e-122
Identities = 224/226 (99%), Gaps = 1/226 (0%)
Strand = Plus / Minus
Query: 1 ttggcatcggccttgggactcaaaatgtacccgtacataggcaaacatgtccacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttggcatcggccttgggactcaaaatgtacccgtacataggcaaacatgtccacacacac 366
Query: 61 aggcaaacatgcctgcacacatgcacataatacacacatgaaaatgggggcgggagagaa 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 365 aggcaaacatgcctgcacacatgcacataatacacacatgaaaatgagggcgggagagaa 306
Query: 121 aacaaaaatgggtagggagagggaaaactttaatatttagcctgatgaagtagaggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aacaaaaatgggtagggagagggaaaactttaatatttagcctgatgaagtagaggaaaa 246
Query: 181 caaatcattttattaccaaaagaagaaagattatatactgtagtgt 226
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 caaat-attttattaccaaaagaagaaagattatatactgtagtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 625
Length adjustment: 9
Effective length of query: 217
Effective length of database: 616
Effective search space: 133672
Effective search space used: 133672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
