Query= MSMg01no438_m10.b1 MSMg01no438_m10.b1 CHROMAT_FILE:
MSMg01no438_m10.b1 PHD_FILE: MSMg01no438_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:40 2005
(515 letters)
>mm_chr8_47019888_47020797
Length = 910
Score = 909 bits (470), Expect = 0.0
Identities = 495/506 (97%), Gaps = 5/506 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcaaatttcctccccatgctatagctcatttcccaccaatatttactgcaaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gaattctttcaaatatcctccccatgctatagctcatttcccaccaatatttactgcaaa 646
Query: 65 aacgtagattttacctggttcattgcccccgctttcctttaccccctcagaggaattcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aacgtagattttacctggttcattgcccccgctttcctttaccccctcagaggaattcag 586
Query: 125 gatcttggatgctgaaaggagaatggagtcaacatcatcttcttccacgaggtgcttctc 184
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 585 gatcttggatgctgaaaggagaatggagtcaacttcatcttcttccgcgaggtgcttctc 526
Query: 185 tggaacagacccgagcacagcttttggcggagagctggaaggcagcctgggaaggtgaag 244
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 525 tggaacagacccgagcacagcttttg-----gagctggaaggtagcctgggaaggtgaag 471
Query: 245 aagcgaggcacagacattcgggtcgcccacgccctctgtggccaccagagggcgcgctat 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aagcgaggcacggacattcgggtcgcccacgccctctgtggccaccagagggcgcgctat 411
Query: 305 gatcaggtagagatgtcaactctgcaaataggggtgaaggcggcatcccgccagggggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gatcaggtagagatgtcaactctgcaaataggggtgaaggcggcatcccgccagggggca 351
Query: 365 ggcgagtgctttctcactgagcaggggatttgaggtcgggaagataacgcacaccagacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggcgagtgctttctcactgagcaggggatttgaggtcgggaagataacgcacaccagacc 291
Query: 425 catccggaaaactccggaggctttgggatgaagggacttgggtgtggttccactatcctc 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 290 catccggaaaactccggaggctttgggatgaagggacatgggtgtggttccactatcctc 231
Query: 485 catttcccagagcctccctctagagg 510
||||||||||||||||||||||||||
Sbjct: 230 catttcccagagcctccctctagagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 910
Length adjustment: 10
Effective length of query: 505
Effective length of database: 900
Effective search space: 454500
Effective search space used: 454500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_m10.g1 MSMg01no438_m10.g1 CHROMAT_FILE:
MSMg01no438_m10.g1 PHD_FILE: MSMg01no438_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:41 2005
(411 letters)
>mm_chr8_46886280_46887089
Length = 810
Score = 698 bits (361), Expect = 0.0
Identities = 402/419 (95%), Gaps = 10/419 (2%)
Strand = Plus / Plus
Query: 1 cataacccactctaatcagctaatcagctagctcctttagaattactaatggacaggata 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 194 cataacccactctaatcagctaatcagctagctcctttagaattactaacggacaggata 253
Query: 61 atttattttcaagttcagctgtgaatcgccac-----a--tcttaaaccccatcagttac 113
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 254 atttattttcaagttcagctgtgaatcgccacgtcttaagtcttaaaccccatcagttac 313
Query: 114 atgagtgacacacaatgaatgcagaagggcttcacggggaaatgagaagcgtattttttc 173
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 314 atgagtgacacacaatgaatgcagaagggcttcacggggagatgagaagcgtattttttc 373
Query: 174 tagaaatgtttctgtcaagaattgagttttttttttaagtgatacagagtagttatccct 233
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 374 tagaaatgtttctgtcaagaattgaggttttttttaaagtgatacagagtagttatccct 433
Query: 234 acctagcaaggggaacttgtatagcatttgtatgtctagctacatcgagggcagttagtg 293
||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acctagcgaggg-aacttg-agagcatttgtatgtctagctacatcgagggcagttagtg 491
Query: 294 gcatgaacaagaacacctacgcacagaggaccctgcagagaaagctgcatcttacagcgc 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 492 gcatgaacaagaacacctacgcacagaggaccctgcagagaaagctgcatcttacagcac 551
Query: 354 tcagcgtttagagattcctaggaaaa-cccagtcctgccctgtctgtggtgtgtgttgg 411
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 552 tcagcgtttagagattcctaggaaaaacccagtcctgccctgtctgtggtgtgtgttgg 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 810
Length adjustment: 9
Effective length of query: 402
Effective length of database: 801
Effective search space: 322002
Effective search space used: 322002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
