Query= MSMg01no438_p12.b1 MSMg01no438_p12.b1 CHROMAT_FILE:
MSMg01no438_p12.b1 PHD_FILE: MSMg01no438_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:56 2005
(515 letters)
>mm_chr8_119226065_119226979
Length = 915
Score = 609 bits (315), Expect = e-178
Identities = 383/413 (92%), Gaps = 15/413 (3%)
Strand = Plus / Minus
Query: 5 gaattctagagatttaggttagaaagc-aatatatactcactatatttttttttttttaa 63
||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||
Sbjct: 413 gaattctagagatttaggttagatagcaaatatatactcactata-tattttttttttaa 355
Query: 64 ctagggtttgaggagatagctgaatgttacgctttgttcgggcttgcaatcacgtgtgag 123
|||||||||||||||||||||||||||||| || |||| ||||||||||||||| |||||
Sbjct: 354 ctagggtttgaggagatagctgaatgttacactctgttggggcttgcaatcacgcgtgag 295
Query: 124 aacatgagtttagactgctagaatccaacataaattctatacggccgtacaagcccactt 183
||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||
Sbjct: 294 aacatgagtttagactgctagaatccagcacaaattctatacggccatacaagcccactt 235
Query: 184 gtgagtccggcctatgttccttgtatgcctttctgtgtggtgtgtacacgtgcgcgcagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gtgagtccggcctatgttccttgtatgcctttctgtgtggtgtgtacacgtgcgcgcagt 175
Query: 244 tgcctgtggagggccagtggacggaggttgatcctctggagcaggagttacaggaggctg 303
||||||||||||||||| |||||||||||||||| |||| || |||||||||||||| ||
Sbjct: 174 tgcctgtggagggccagaggacggaggttgatcccctggtgcgggagttacaggaggttg 115
Query: 304 tgagccagctgatgttggtgctgggagttgaactctggtcctctgcaagagaagtaagta 363
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 114 tgagccagctgatgttggtgctgggagttgaactccggtcctctgcaagagaagta---- 59
Query: 364 tgtgctcttgacaactg---------tccagtgctagtactagactctttaag 407
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 58 tgtgctcttgacaactgagccatctgtccagtgctagtactagactctttaag 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_p12.g1 MSMg01no438_p12.g1 CHROMAT_FILE:
MSMg01no438_p12.g1 PHD_FILE: MSMg01no438_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:56 2005
(504 letters)
>mm_chr8_119183845_119184748
Length = 904
Score = 928 bits (480), Expect = 0.0
Identities = 498/504 (98%)
Strand = Plus / Plus
Query: 1 tcttgctactcctgttcaacaagatgcatgcatgctaggaaacaaccaagctgcttttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgctactcctgttcaacaagatgcatgcatgctaggaaacaaccaagctgcttttat 260
Query: 61 tcccagaaggcatgtttatcaatgtagatgatcagactgagttctttaccaagtctgtga 120
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tcccagaaggcatgtttatcgatgtagatgatcagactgagttctttacaaagtctgtga 320
Query: 121 actaattaacttcagcaagatgcgtgacctaagggtataaaggaaaccagtcctactccc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 actaattaacttcagcaagatgcgtgacctaagggtataaaggaaaccggtcctactccc 380
Query: 181 ccatgttgataacagataaccagagacttccaaaaaaaatactgtgataacgggtctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatgttgataacagataaccagagacttccaaaaaaaatactgtgataacgggtctgga 440
Query: 241 ttgtcaacttgattagactgaggaatacttaacagattagagaagcatagaccaggatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtcaacttgattagactgaggaatacttaacagattagagaagcatagaccaggatat 500
Query: 301 agtgctgaggacattttcagagacagttagataatgaaggttcttgcctgaagaattaat 360
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 501 agtgctgaggacattttcagagacagttagacaacgaaggttcttgcctgaagaattaat 560
Query: 361 taataagcccttggtagatcttaacatgacagcattatgggaaaaggaggggaacctaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taataagcccttggtagatcttaacatgacagcattatgggaaaaggaggggaacctaac 620
Query: 421 tgaaagaagtggatctctaggaatgtgttctaaggactatattttgcccttgctgtattc 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 tgaaagaagtggatctctaggaatgtgttctgaggactatattttgcccttgctgtattc 680
Query: 481 tttgctctgttctattttccatga 504
||||||||||||||||||||||||
Sbjct: 681 tttgctctgttctattttccatga 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
