Query= MSMg01no439_c11.b1 MSMg01no439_c11.b1 CHROMAT_FILE:
MSMg01no439_c11.b1 PHD_FILE: MSMg01no439_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:11 2005
(521 letters)
>mm_chr8_51796661_51797581
Length = 921
Score = 961 bits (497), Expect = 0.0
Identities = 512/517 (99%)
Strand = Plus / Minus
Query: 5 ggctcacaaaaatttgcaatgtgatctaatacccttttctggtgtttctgaagacagcta 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 830 ggctcacaaaaatttgcaatgtgatctaatactcttttctggtgtttctgaagacagcta 771
Query: 65 tagtgtatccatatatatgaaataaataattctttaaaaaaggaaacaacatcaaagcat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 cagtgtatccatatatatgaaataaataattctttaaaaaaggaaacaacatcaaagcat 711
Query: 125 aataaaatagtaataacagagagcaattttttctagtaatatttcacaccaatcttcatg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 710 aataaaatagtaataacagagagcaattttttctagtaatatttcacaccaaccttcatg 651
Query: 185 cttcaagttttgcccaggcaaaacttgttctgttcttgtaaagtacacattgcgttctct 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cttcaagttttgcccaggcaaaacttgttctgttcttgtaaagtacacattgcgttctca 591
Query: 245 ttttagaataaagataaggatatactggacagagaaaagacatgttgaaaagtccaaaga 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gtttagaataaagataaggatatactggacagagaaaagacatgttgaaaagtccaaaga 531
Query: 305 aattattatgatttaaacttctgtcacagtcttatagatttttcttttctatattctgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aattattatgatttaaacttctgtcacagtcttatagatttttcttttctatattctgtt 471
Query: 365 ttctattgaattgtcaattctgctttatttgcatatttttgtttaaagaaagtgagcaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttctattgaattgtcaattctgctttatttgcatatttttgtttaaagaaagtgagcaga 411
Query: 425 gggagtcaatgtgaaggtatcctaaagtcaagataattatcagtgaggagttatctatta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gggagtcaatgtgaaggtatcctaaagtcaagataattatcagtgaggagttatctatta 351
Query: 485 atcattaccaatgtaaaattgactcatttttgtctac 521
|||||||||||||||||||||||||||||||||||||
Sbjct: 350 atcattaccaatgtaaaattgactcatttttgtctac 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_c11.g1 MSMg01no439_c11.g1 CHROMAT_FILE:
MSMg01no439_c11.g1 PHD_FILE: MSMg01no439_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:11 2005
(369 letters)
>mm_chr8_51624728_51625496
Length = 769
Score = 677 bits (350), Expect = 0.0
Identities = 365/370 (98%), Gaps = 2/370 (0%)
Strand = Plus / Plus
Query: 1 attctttatcatctggagttttgcaactctcttctttcattaaattttcataaattattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttatcatctggagttttgcaactctcttctttcattaaattttcataaattattc 260
Query: 61 tgactatgaacagtcacataacaaggaacagatacatgctagagacccaaaatatgaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactatgaacagtcacataacaaggaacagatacatgctagagacccaaaatatgaggc 320
Query: 121 atatgttataaattctagaatttacaaatcatggaaatgaaaagaaataaacttgtgatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgttataaattctagaatttacaaatcatggaaatgaaaagaaataaacttgtgatc 380
Query: 181 aatacacataaaattgacagataaaagcagaatatttgactaatactattaatatttgca 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 aatacacataaaattgacagataaaaacagaatatttgactaatactattaatatttgca 440
Query: 241 ctta-tccttcaaacatgcctgaggatttctatttttaatattacttaatctgatatagt 299
|||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 cttagtc-ttcaaacatgcctgaggatttatatttttaatattacttaatctgatatagt 499
Query: 300 taggtttggcacttatgacaaacctaaactgcatttctgtctttgaccttcatgctatta 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taggtttgggacttatgacaaacctaaactgcatttctgtctttgaccttcatgctatta 559
Query: 360 tgccacatta 369
||||||||||
Sbjct: 560 tgccacatta 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
