MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-440J06
Chromosome	8 (Build37)
Map Location	59,221,532 - 59,221,972
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream gene	LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC664916 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Adam29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244486 MGI:2676326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glra3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110304 MGI:95749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins pseudo : _no_value

name	Hpgd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15446 MGI:108085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664948 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	BC088983 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382010 MGI:3525111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxo8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50753 MGI:1354696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040431 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	EG624433 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624433 MGI:3644902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC654355 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654355
definition	note : glutamate receptor, ionotropic, NMDA2A (epsilon 1) pseudogene pseudo : _no_value

name	LOC100040515 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Hand2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15111 MGI:103580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scrg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20284 MGI:1328308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sap30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60406 MGI:1929129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97165 MGI:96157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547012 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Galnt7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108150 MGI:1349449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040634 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3927 ESTs, 23 Proteins

name	Adam29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341647 GeneID:244486 MGI:2676326
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 29 transcript_id : NM_175939.2

name	Glra3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300935 GeneID:110304 MGI:95749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine receptor, alpha 3 subunit transcript_id : NM_080438.2

name	Hpgd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486705 GeneID:15446 MGI:108085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxyprostaglandin dehydrogenase 15 (NAD) transcript_id : NM_008278.2

name	BC088983 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57977301 GeneID:382010 MGI:3525111
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC088983 transcript_id : NM_001009951.1

name	Fbxo8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802784 GeneID:50753 MGI:1354696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 8 transcript_id : NM_015791.3

name	LOC100040515 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258767 GeneID:100040515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100040515 transcript_id : XM_001474844.1

name	Hand2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802037 GeneID:15111 MGI:103580
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heart and neural crest derivatives expressed transcript 2 transcript_id : NM_010402.3

name	Scrg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226218 GeneID:20284 MGI:1328308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : scrapie responsive gene 1 transcript_id : NM_009136.3

name	Sap30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12408289 GeneID:60406 MGI:1929129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sin3 associated polypeptide transcript_id : NM_021788.1

name	Hmgb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982287 GeneID:97165 MGI:96157
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box 2 transcript_id : NM_008252.2

name	Galnt7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802107 GeneID:108150 MGI:1349449
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 transcript_id : NM_144731.3

name	LOC100040634 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258769 GeneID:100040634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3926 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001474733.1

name	LOC100040634 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258771 GeneID:100040634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 90 mRNAs, 1682 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001474752.1

name	Adam29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28565283 CCDS:CCDS22311.1 GeneID:244486 MGI:2676326
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : a disintegrin and metalloproteinase domain 29 product : a disintegrin and metalloprotease domain 29 protein_id : NP_787953.1

name	Glra3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120300936 GeneID:110304 MGI:95749
definition	GO_component : GO:0016935 - glycine-gated chloride channel complex [Evidence ISS]; GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0016594 - glycine binding [Evidence ISS]; GO:0016934 - glycine-gated chloride channel activity [Evidence ISS] [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence ISS] [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA] [Evidence ISS]; GO:0007268 - synaptic transmission [Evidence IEA] [Evidence ISS] codon_start : 1 product : glycine receptor, alpha 3 subunit protein_id : NP_536686.2

name	Hpgd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486706 GeneID:15446 MGI:108085
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0016404 - 15-hydroxyprostaglandin dehydrogenase (NAD+) activity [Evidence ISS]; GO:0051287 - NAD binding [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004957 - prostaglandin E receptor activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0019372 - lipoxygenase pathway [Evidence ISS]; GO:0045786 - negative regulation of progression through cell cycle [Evidence ISS]; GO:0007567 - parturition [Evidence ISS]; GO:0007565 - pregnancy [Evidence ISS]; GO:0006693 - prostaglandin metabolism [Evidence ISS]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 product : hydroxyprostaglandin dehydrogenase 15 (NAD) protein_id : NP_032304.2

name	BC088983 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57977302 CCDS:CCDS22313.1 GeneID:382010 MGI:3525111
definition	codon_start : 1 product : hypothetical protein LOC382010 protein_id : NP_001009951.1

name	Fbxo8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542801 CCDS:CCDS22314.1 GeneID:50753 MGI:1354696
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0000151 - ubiquitin ligase complex [Evidence IPI] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IPI] codon_start : 1 product : F-box only protein 8 protein_id : NP_056606.2

name	LOC100040515 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258768 GeneID:100040515
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474894.1

name	Hand2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30231224 CCDS:CCDS22315.1 GeneID:15111 MGI:103580
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0007512 - adult heart development [Evidence IMP]; GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI]; GO:0001947 - heart looping [Evidence IMP]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : bHLH transcription factor product : heart and neural crest derivatives expressed transcript 2 protein_id : NP_034532.2

name	Scrg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677877 GeneID:20284 MGI:1328308
definition	codon_start : 1 note : scrapie responsive protein one product : scrapie responsive gene 1 protein_id : NP_033162.1

name	Sap30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12408290 CCDS:CCDS22316.1 GeneID:60406 MGI:1929129
definition	GO_component : GO:0016580 - Sin3 complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : sin3 associated polypeptide, 30kD; Sin3-associated protein product : sin3 associated polypeptide protein_id : NP_068560.1

name	Hmgb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680229 GeneID:97165 MGI:96157
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0000793 - condensed chromosome [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0008301 - DNA bending activity [Evidence ISS]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] GO_process : GO:0006288 - base-excision repair, DNA ligation [Evidence ISS]; GO:0006323 - DNA packaging [Evidence IEA]; GO:0006281 - DNA repair [Evidence ISS]; GO:0006260 - DNA replication [Evidence ISS]; GO:0006268 - DNA unwinding during replication [Evidence ISS]; GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence ISS]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : high mobility group protein 2 product : high mobility group box 2 protein_id : NP_032278.1

name	Galnt7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542882 CCDS:CCDS22317.1 GeneID:108150 MGI:1349449
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IDA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : ppGaNTase-T7 product : UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein_id : NP_653332.2

name	LOC100040634 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258770 GeneID:100040634
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001474783.1

name	LOC100040634 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258772 GeneID:100040634
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001474802.1

name	LOC664916 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664916
definition	number : 1 pseudo : _no_value

name	LOC664916 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664916
definition	number : 2 pseudo : _no_value

name	LOC664948 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664948
definition	number : 1 pseudo : _no_value

name	LOC664948 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664948
definition	number : 2 pseudo : _no_value

name	LOC100040431 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040431
definition	number : 1 pseudo : _no_value

name	LOC100040431 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040431
definition	number : 2 pseudo : _no_value

name	EG624433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624433
definition	number : 1 pseudo : _no_value

name	LOC547012 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547012
definition	number : 1 pseudo : _no_value

name	LOC664812 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258766 GeneID:664812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to ribosomal protein S7 pseudo : _no_value transcript_id : XR_031818.1

clone name	MSMg01-513C11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-277N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307K16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-440J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321M02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-397D12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-405P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135N07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-440J06.T7 (MSMg01no440_j06.b1)	MSMg01-440J06.TJ (MSMg01no440_j06.g1)
ACC	AG530662	AG530663
length	821	752
length of high quality (start - end)	108 (48 - 155)	474 (82 - 555)
definition	CHROMAT_FILE: MSMg01no440_j06.b1 PHD_FILE: MSMg01no440_j06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:07:04 2005	CHROMAT_FILE: MSMg01no440_j06.g1 PHD_FILE: MSMg01no440_j06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:07:04 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TAACCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAATCCGC GGAATTCTGCACTAATTTCATCTAGCTCTGGGCTGCTGCTGTTGTTGTTG TTGTTGTTGTTGTTGTTGGGAAGTTTTTAATCCGCGCTTCTATTTCCTTA CGAGTTATGCTACTCTTTATATAGTTTACTTGATCCTGATTCATCATTGC CATGCCACATCTGCCTATTATATCACCTCTTTCATCTATTATTTTTTCAC CTATTTTTTTGTTCGNCACTATTACACCTATTTCTTTTTAACCCNNCTTT ATTTTTTTTCTTATCCTAATACTAACTTTAAATTCTATTCTTATCTTTTT TCTTCTCCACTTCTATCACCCCTATCTCTCACTACTTTTATTACTCTTTC ACATTCCTTTCTTTTACAACAAATCTCTCCATTCCTTTTTTTTCTCTACC CTCTTCCTCTCTTCACCCTAAACTCTCTTTCCTCATTCATATACAATTTT TATTATTCTTTTTCACCCCCTCTTTCTCCCCTAACTTTATACCTTTTTTA TATTATCAATCTCCCTAACTTCCTTATATTTCTCTTACCTCTTCTACTTC TCTCCCACTCTACTCATTTTCTTCCCTTTTTTAATACTCCATAACCACAC TCCCCCATCTCCCAATCCCTTTCTTATCTCCTTATTCTTCCATCCTTCTC CACAATCTTCCATTCTTATTTATCTTTCCTCTCCCTCCTTTACATCCTCT ACTTCCTCTACTTATAAAATTCTTTCTTCTTCAATTATATTCCCCTTAAT TCGATTTTCTCCTCACACTTG	NATTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXTTGCCAAATTCCATAGGAGCGACCACTCAC TGGCACACAAGAATATCAGTAAGTGATAGGACTATAAAAACACATTCCTT TCTGCCTAACTGGACTAGCGAACACCAAGGACAGAATCTCACAGAAGCAG TAGCAAATGCCTTCCAGGTTTTTATTCTGAGCAGGCACTATTGGAATGAA GTGAAGCAAAGATTTGTGCCTCACTGTTTATTATGCAAATAATGATAGTG ATAATAATAATAATCAGCAATAGTTGGAGTTTGTTCCTTTAGATGAGACA ATTAGGCATAGACTTATTAGAAAATATGCTGATCCATTGTCTGTTTTAAA GAAAGCAAAGACGTCGAATTATTTGCTAATGTGCACTGAGGGAGTCATAC TCACAAATAAGGCATGGCAGTGTTACAGAATTCTGGTTCAAATGTACATT TCACCTAATGGTCTAAGAAGGAACTGGAGGGTTTTCTTCACATGGCCTTT TCTTAGCAAACATGTGGTTTGGCTTCCATAATATATCTACTTAAAAGAAA CTTGGAACTAAAAGCTAGAATGACTTTAATCTGGAAGGGAAAATTCTATA AAAGATGCTTTCTACCTTGGCTACCTTTCAGAATTAATCTCCAGAAAAAA ACCAGAAAAAAAGCCTCTAAATTATAGGAACCTTGATTGGGGCCTAAAAA TG
quality values	Open. Hide. 7 7 6 6 7 7 11 10 9 14 13 13 21 25 33 28 28 29 31 41 27 29 20 15 15 16 24 37 30 29 31 31 27 23 22 16 10 9 11 11 9 9 8 8 8 9 15 22 27 25 33 30 30 29 29 36 31 33 33 33 33 34 25 16 12 10 8 8 8 8 8 10 27 22 36 36 41 43 43 48 59 59 57 59 59 57 57 57 57 57 48 59 59 57 59 59 57 57 57 57 54 54 54 54 54 54 54 54 54 48 50 50 54 54 54 44 44 37 35 35 32 43 28 34 20 20 20 15 16 10 8 8 8 10 13 8 19 15 30 32 37 37 43 43 43 43 48 30 30 18 12 12 12 15 17 25 16 10 8 8 8 8 15 15 15 11 8 8 8 8 8 13 10 16 15 20 15 23 18 21 12 10 8 10 8 8 10 14 14 23 12 8 8 8 8 8 15 8 8 8 8 10 13 12 8 8 6 6 8 10 17 18 13 12 12 15 11 9 9 9 9 9 9 12 10 11 10 10 11 20 18 12 11 11 11 11 11 9 8 8 6 6 6 10 13 13 11 8 8 8 8 9 8 9 9 13 10 10 8 8 8 7 8 7 3 0 3 9 9 9 12 10 10 10 9 8 8 8 8 6 6 8 8 10 11 12 8 8 8 6 6 8 9 3 0 0 3 10 10 12 13 13 10 10 10 10 8 8 8 8 8 6 6 8 8 10 9 9 8 8 7 7 7 8 8 8 8 8 10 8 7 7 8 8 10 10 15 12 11 12 8 8 8 8 6 6 8 8 11 9 10 9 9 8 8 8 9 8 8 9 8 8 8 8 8 8 8 6 6 8 8 8 8 9 9 9 10 12 10 8 8 8 6 6 6 7 8 8 10 10 10 8 8 10 8 8 8 8 8 11 8 9 8 8 8 8 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 8 8 6 6 8 8 10 12 12 10 16 15 13 13 10 10 10 10 8 8 10 10 9 9 9 9 9 10 10 8 8 8 8 10 10 8 8 6 6 8 8 10 12 8 8 8 8 8 9 10 10 16 9 8 8 10 8 8 8 8 6 6 8 8 10 11 11 12 11 11 10 13 7 6 6 6 8 6 8 8 8 8 10 8 8 8 8 8 8 8 13 8 8 8 10 8 13 13 13 11 10 9 9 10 9 9 9 11 15 12 8 8 11 8 8 8 12 15 10 10 8 8 8 8 8 8 10 8 6 8 8 8 8 8 11 11 8 8 8 8 6 6 8 8 8 8 8 8 10 13 12 11 13 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 10 11 11 11 11 12 12 10 8 8 8 8 8 8 11 11 13 10 15 8 8 8 8 11 10 16 11 9 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 10 10 9 8 8 6 6 8 8 8 10 10 10 10 10 10 10 13 10 10 10 8 8 8 8 10 8 8 8 8 10 10 8 13 11 12 12 11 13 10 10 9 10 9 9 9 9 8 8 9 9 9 9 11 9 8 8 8 8 8 7 9 8 8 6 6 6 6 8 12 9 9 9 11 11 11 11 10 12 13 10 10 11 13 13 10 10 10 12 9 9 9 9 9 9 9 10 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 6 7 8 8 9 10 10 8 10 10 10 10 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 6 7 9 9 10 10 12 13 13 9 8 8 8 8 8 8 6 8 8 8	Open. Hide. 0 3 7 6 6 8 6 6 7 10 10 10 10 9 9 15 17 31 30 31 28 22 20 30 30 37 32 33 18 18 18 17 17 17 26 32 25 25 11 9 9 9 9 9 9 9 10 13 11 15 18 19 30 30 33 36 36 36 53 44 41 41 30 28 28 23 27 11 12 8 8 6 6 6 6 9 10 10 10 11 13 12 25 25 33 37 39 44 44 36 53 53 53 53 53 53 53 48 48 48 53 47 43 43 42 42 47 48 43 51 51 51 51 51 51 51 47 42 44 37 37 43 44 47 50 50 47 43 43 48 57 57 57 57 59 59 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 43 40 40 57 57 50 50 44 44 43 57 59 47 50 50 57 57 57 68 59 50 50 37 37 41 50 57 57 68 68 57 68 68 68 68 68 68 68 57 57 42 43 35 59 59 59 52 52 52 57 57 57 57 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 62 62 68 62 62 62 62 62 62 44 44 39 27 43 23 31 31 35 33 34 57 57 57 57 57 68 68 57 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 57 57 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 57 57 59 57 57 57 57 57 57 59 59 59 59 50 44 43 28 28 17 22 22 44 44 57 57 57 59 59 57 59 59 59 68 68 68 59 68 59 59 54 54 54 59 59 59 59 59 54 57 57 59 59 59 59 54 47 47 46 59 59 59 59 59 59 59 59 59 59 68 59 59 57 53 50 50 50 50 48 57 57 59 57 57 57 57 57 53 44 59 48 46 46 46 41 41 41 41 37 37 39 39 41 39 40 39 39 43 59 47 47 50 38 42 42 57 57 34 28 28 28 28 35 48 59 41 40 40 39 39 39 39 32 31 26 22 28 29 29 30 28 16 16 9 19 16 19 16 10 10 10 10 16 18 16 14 18 20 21 16 15 14 14 15 10 11 11 12 10 10 10 15 22 28 31 41 34 28 21 18 12 17 14 15 19 19 11 14 9 9 9 15 25 29 20 9 10 9 9 9 9 9 8 8 8 8 11 11 11 12 13 15 15 10 10 10 8 8 8 18 12 12 14 11 10 12 10 10 12 9 12 8 8 8 8 10 15 11 12 11 19 10 8 8 8 8 8 12 22 22 10 10 8 10 8 8 8 8 8 9 9 10 11 10 14 12 10 10 10 13 11 12 16 13 21 13 12 8 8 8 8 8 8 11 11 13 17 17 22 16 16 10 8 8 8 10 13 13 11 9 10 8 8 8 10 9 14 9 11 12 12 10 10 9 9 9 10 9 8 8 9 8 10 10 8 8 8 8 10 10 10 10 11 11 12 12 18 22 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no440_j06.g1 MSMg01no440_j06.g1 CHROMAT_FILE:
MSMg01no440_j06.g1 PHD_FILE: MSMg01no440_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:04 2005
         (474 letters)



>mm_chr8_59221099_59221972
          Length = 874

 Score =  799 bits (413), Expect = 0.0
 Identities = 433/441 (98%), Gaps = 3/441 (0%)
 Strand = Plus / Minus

                                                                       
Query: 37  agtaagtgataggactataaaaacacattcctttctgcctaactggactagcgaacacca 96
           ||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 874 agtaagtgataggactataaaaacacattccttactacctaactgaactagcgaacacca 815

                                                                       
Query: 97  aggacagaatctcacagaagcagtagcaaatgccttccaggtttttattctgagcaggca 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aggacagaatctcacagaagcagtagcaaatgccttccaggtttttattctgagcaggca 755

                                                                       
Query: 157 ctattggaatgaagtgaagcaaagatttgtgcctcactgtttattatgcaaataatgata 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ctattggaatgaagtgaagcaaagatttgtgcctcactgtttattatgcaaataatgata 695

                                                                       
Query: 217 gtg---ataataataataatcagcaatagttggagtttgttcctttagatgagacaatta 273
           |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gtgataataataataataatcagcaatagttggagtttgttcctttagatgagacaatta 635

                                                                       
Query: 274 ggcatagacttattagaaaatatgctgatccattgtctgttttaaagaaagcaaagacgt 333
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ggcagagacttattagaaaatatgctgatccattgtctgttttaaagaaagcaaagacgt 575

                                                                       
Query: 334 cgaattatttgctaatgtgcactgagggagtcatactcacaaataaggcatggcagtgtt 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cgaattatttgctaatgtgcactgagggagtcatactcacaaataaggcatggcagtgtt 515

                                                                       
Query: 394 acagaattctggttcaaatgtacatttcacctaatggtctaagaaggaactggagggttt 453
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 514 acagaattctggttcaaatgtacatttcacctaatggtctaagaaggaactggaggattt 455

                                
Query: 454 tcttcacatggccttttctta 474
           |||||||||||||||||||||
Sbjct: 454 tcttcacatggccttttctta 434


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information