Query= MSMg01no440_m20.b1 MSMg01no440_m20.b1 CHROMAT_FILE:
MSMg01no440_m20.b1 PHD_FILE: MSMg01no440_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:22 2005
(447 letters)
>mm_chr8_118131595_118132440
Length = 846
Score = 787 bits (407), Expect = 0.0
Identities = 431/439 (98%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 9 gaattccagattggattttggctgcatttattgaaagaagttttatatgagatactaaaa 68
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattccagattggaatttggctgcatttattgaaagaagttttatatgagatactaaaa 268
Query: 69 cacaaggagcagtgtgataccctaatatacacaggactcaagacagttataatttctgat 128
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 269 cacaaggagcagtgtgataccctaatatacacaggactcaagacaactataatttctgat 328
Query: 129 ctgtgattttcttttgcatgaaccaatgtaatcatcaggctcaaagcagttacacatggt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgtgattttcttttgcatgaaccaatgtaatcatcaggctcaaagcagttacacatggt 388
Query: 189 ngggtcagttttaaagacacaacacaaattccatgccttcattactccccctgcatggta 248
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 389 -gggtcagttttaaagacacaacacaaattccgtgccttcattactccccctgcatggta 447
Query: 249 gtactagggccatgttatcacagctgccagtaggaaattctctgagttttattagtggag 308
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 448 ttactagggccatgttatcacagttgccattaggaaattctctgagttttattagtggag 507
Query: 309 tggtttcttgctttttgggggtctctaacaaaccttctacctcagcctgcatgtatatgg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tggtttcttgctttttgggggtctctaacaaaccttctacctcagcctgcatgtatatgg 567
Query: 369 gtggagaatcccatatggattcagtttgcacttcacacagagaaaccattctctttctaa 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtggagaatcccatatggattcagtttgcacttcacacagagaaaccattctctttctaa 627
Query: 429 aggtagatggtggggatcg 447
|||||||||||||||||||
Sbjct: 628 aggtagatggtggggatcg 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space: 365332
Effective search space used: 365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_m20.g1 MSMg01no440_m20.g1 CHROMAT_FILE:
MSMg01no440_m20.g1 PHD_FILE: MSMg01no440_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:22 2005
(385 letters)
>mm_chr8_118277593_118278377
Length = 785
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%)
Strand = Plus / Minus
Query: 71 aggacaggtaaagccagtgaagagcaaaccatacatcagtaattgccaggagaggcatag 130
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 785 aggacaggtaaagccagtgaagagcaagccatacatcagtaattgccaggagaggcatag 726
Query: 131 agtaagagctgattgcctagtggcttggagttttcatgaaagtcttagaagtaaatcggg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agtaagagctgattgcctagtggcttggagttttcatgaaagtcttagaagtaaatcggg 666
Query: 191 ttctgttttcacatacaaacacttccagtaccactgaagcgtacaccttaaaaatgccag 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttctgttttcacatacaaacacttccagtaccactgaagcgtacaccttaaaaatgccag 606
Query: 251 ttttacactatgtgaatttccatgtgggcgttcgaatatgaaaggaagaaaatagaaagg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttttacactatgtgaatttccatgtgggcgttcgaatatgaaaggaagaaaatagaaagg 546
Query: 311 aaagcagcggttgtcagagtccagtacggattcacactttgaggcagggaagtctcttaa 370
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 545 aaagcagcggttgtcagagtccagtacggattcaccctttgaggcagggaagtctcttaa 486
Query: 371 atctctttcattaag 385
|||||||||||||||
Sbjct: 485 atctctttcattaag 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
