Query= MSMg01no441_g21.b1 MSMg01no441_g21.b1 CHROMAT_FILE:
MSMg01no441_g21.b1 PHD_FILE: MSMg01no441_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:12 2005
(427 letters)
>mm_chr8_72799780_72800606
Length = 827
Score = 791 bits (409), Expect = 0.0
Identities = 420/427 (98%), Gaps = 7/427 (1%)
Strand = Plus / Plus
Query: 5 gaattcattgagac----ttgcctcactatgtagcgctggatggcctgtaactccctatc 60
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcattgagacagggt---ctcactatgtagcgctggatggcctgtaactccctatc 260
Query: 61 ccttaaagtagcacagatatgctctcctctgtgttccaaatgctgggattaaaggtccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttaaagtagcacagatatgctctcctctgtgttccaaatgctgggattaaaggtccca 320
Query: 121 gtatttaactttatttataggcaaggtttaatgtactccaggctgatctgaaacttagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatttaactttatttataggcaaggtttaatgtactccaggctgatctgaaacttagta 380
Query: 181 agtacccaagactggccctttaactcctgatcctcctgcccaggtctccttggtgctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtacccaagactggccctttaactcctgatcctcctgcccaggtctccttggtgctagg 440
Query: 241 atgtgtccactgcacccagaaccctatttctaaaacaccctgctaagttatttgcctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgtccactgcacccagaaccctatttctaaaacaccctgctaagttatttgcctttc 500
Query: 301 accaaacccaaagctccatgcggagccccctctcaggaagctctcaggctgggagagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accaaacccaaagctccatgcggagccccctctcaggaagctctcaggctgggagagcaa 560
Query: 361 accgtccacatcctaaccagaccacagaaggagcttcagatccagagccctggtggtaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accgtccacatcctaaccagaccacagaaggagcttcagatccagagccctggtggtaca 620
Query: 421 tgtgtgt 427
|||||||
Sbjct: 621 tgtgtgt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_g21.g1 MSMg01no441_g21.g1 CHROMAT_FILE:
MSMg01no441_g21.g1 PHD_FILE: MSMg01no441_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:12 2005
(402 letters)
>mm_chr8_72970672_72971473
Length = 802
Score = 777 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Minus
Query: 1 agatctcagcacccatgaagaaaacagtgtctgtaacctgtggagagtggaggactagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agatctcagcacccatgaagaaaacagtgtctgtaacctgtggagagtggaggactagtg 380
Query: 61 attctgcaaagagattggctgagaggagagagcaggacatatgatgtcatctgcctccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attctgcaaagagattggctgagaggagagagcaggacatatgatgtcatctgcctccac 320
Query: 121 ttgtgcacagtataacgtgaatgtgacatgtggatccatacagagcattcccctagtgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttgtgcacagtataacgtgaatgtgacatgtggatccatacagagcattcccctagtgag 260
Query: 181 tgtgaagccctgcattcaattgttaaataacacacttgcacatacagccaggaccctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtgaagccctgcattcaattgttaaataacacacttgcacatacagccaggaccctcag 200
Query: 241 ctgatgcaggaggatgcaagttcaaggctaccctgggttacataggcagagtgggttagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ctgatgcaggaggatgcaagttcaaggctaccctgggttacataggcagagtgggttagg 140
Query: 301 attaagaagaagcaagaggatgagacagccagatgctgagctgaaaggatgtcatagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 attaagaagaagcaagaggatgagacagccagatgctgagctgaaaggatgtcatagtcc 80
Query: 361 tggaaactgagggcacttctgttctcacaccatgctacagtg 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tggaaactgagggcacttctgttctcacaccatgctacagtg 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
