Query= MSMg01no441_m18.b1 MSMg01no441_m18.b1 CHROMAT_FILE:
MSMg01no441_m18.b1 PHD_FILE: MSMg01no441_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:43 2005
(511 letters)
>mm_chr8_10910251_10911159
Length = 909
Score = 957 bits (495), Expect = 0.0
Identities = 507/511 (99%), Gaps = 2/511 (0%)
Strand = Plus / Plus
Query: 1 aaagagagagactgtagagtcgggacctcaagttgggtgactttgataaagaaagtcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagagagagactgtagagtcgggacctcaagttgggtgactttgataaagaaagtcctg 260
Query: 61 aaaagccctagccgtctgaggaatctggcctttggaagccactcttccagtcaccagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagccctagccgtctgaggaatctggcctttggaagccactcttccagtcaccagcca 320
Query: 121 cagcttaggccaggcaatgccaaagttcactgagaggaaactagagtctggggggggttg 180
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 cagtttaggccaggcaatgccaaagttcactgagaggaaactagagtctggggggg-ttg 379
Query: 181 tggctgtcagaattgttatttcctgtcataatcttgcagcaacagctttctctggcgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggctgtcagaattgttatttcctgtcataatcttgcagcaacagctttctctggcgcag 439
Query: 241 gctggaaatgaagtgtttccttattgtgaaggacctgagatagaggggctaaacgtccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gctggaaatgaagtgtttccttattgtgaaggacctgagatagaggggctaaacgtccca 499
Query: 301 gaatgggaagtcatccaggagcatggacttccccccagagaactctcctcaaggactcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaatgggaagtcatccaggagcatggacttccccccagagaactctcctcaaggactcag 559
Query: 361 catgtggccccaggcacagggaaaaatgcttccacacgaatcttcaccagagtttctcat 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 catgtggccccaggcacagggaaaaa-gcttccacacgaatcttcaccagagtttctcat 618
Query: 421 cagtcaagaagagactaaactctacagtaagtatcccaccaagttcatagctactaacaa 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 619 cagtcaagaagagactaaactctacagtaaatatcccaccaagttcatagctactaacaa 678
Query: 481 gcccggactcaactgttcacacaggaatgtc 511
|||||||||||||||||||||||||||||||
Sbjct: 679 gcccggactcaactgttcacacaggaatgtc 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 909
Length adjustment: 10
Effective length of query: 501
Effective length of database: 899
Effective search space: 450399
Effective search space used: 450399
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_m18.g1 MSMg01no441_m18.g1 CHROMAT_FILE:
MSMg01no441_m18.g1 PHD_FILE: MSMg01no441_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:43 2005
(195 letters)
>mm_chr8_11100241_11100835
Length = 595
Score = 356 bits (184), Expect = e-103
Identities = 190/192 (98%)
Strand = Plus / Minus
Query: 1 acttcttagagggcttcggaatttctgtattagaggaagtgcttgctgaaatcctctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 358 acttcttagagggcttcggaatttctgtattagaggaagtgcttgctgaaatcctttcca 299
Query: 61 cttactaagtgctactttggaattgcacaatgtattgaagaaatgagttagccctggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cttactaagtgctactttggaattgcacaatgtattgaagaaatgagttagccctggctg 239
Query: 121 tgtttgggcacacaggaggaggaggagggacacaagtgggaggtagaggtggtcatggtg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 238 tgtttgggcacacaggaggaggaggagggacacaagtgggaggtggaggtggtcatggtg 179
Query: 181 gtggtggtggtg 192
||||||||||||
Sbjct: 178 gtggtggtggtg 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
