Query= MSMg01no441_o20.b1 MSMg01no441_o20.b1 CHROMAT_FILE:
MSMg01no441_o20.b1 PHD_FILE: MSMg01no441_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:53 2005
(474 letters)
>mm_chr8_94968910_94969783
Length = 874
Score = 917 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 1 gatatcaaagcagtcggggatcaaagtcgttttaataagccaggcgagtgtgcctgcccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatatcaaagcagtcggggatcaaagtcgttttaataagccaggcgagtgtgcctgcccg 260
Query: 61 gcctggcctcttctccctgccctccgaaggcacttaggacaccccttgggccgaattgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctggcctcttctccctgccctccgaaggcacttaggacaccccttgggccgaattgtc 320
Query: 121 actctgattgcttaggtactggtctttaggggaccagaacagcccactcctcccatttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctgattgcttaggtactggtctttaggggaccagaacagcccactcctcccatttta 380
Query: 181 ggtcctacccaccctcctcttcccagaccttaacactgcactgggggctcctgcgccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcctacccaccctcctcttcccagaccttaacactgcactgggggctcctgcgccctg 440
Query: 241 aaggaccatccggaaccattcaccaatcactgttttctcaggaggaccgcagccagtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggaccatccggaaccattcaccaatcactgttttctcaggaggaccgcagccagtgat 500
Query: 301 ggcaaacttgcccaccgatgtactcagagctgagaggtgcaccattaaacacaggaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcaaacttgcccaccgatgtactcagagctgagaggtgcaccattaaacacaggaacaa 560
Query: 361 agtcagttaaaacggttcccctgggcttggttactggaacggggcagctttgatttgggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtcagttaaaacggttcccctgggcttggttactggaacggggcagctttgatttgggt 620
Query: 421 gtcagttacaggggtgtgttcagagaagaaaagtccctgagctggatcattaag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcagttacaggggtgtgttcagagaagaaaagtccctgagctggatcattaag 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_o20.g1 MSMg01no441_o20.g1 CHROMAT_FILE:
MSMg01no441_o20.g1 PHD_FILE: MSMg01no441_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:53 2005
(436 letters)
>mm_chr8_95093680_95094515
Length = 836
Score = 824 bits (426), Expect = 0.0
Identities = 433/436 (99%), Gaps = 2/436 (0%)
Strand = Plus / Minus
Query: 1 agttccccacagatgggctgaggagtcttttacacacacacacacacacacacacacaca 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 719 agttccccacagatgggctgaggagtctttt--acacacacacacacacacacacacaca 662
Query: 61 cacacacacacacacacacacacacgacctttcatgttggcacctatgttttctttcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cacacacacacacacacacacacacgacctttcatgttggcacctatgttttctttcctc 602
Query: 121 ttctgggtcctgaaccaacttctgctgtgaggaagtaaagggttaaatgtgggggaaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttctgggtcctgaaccaacttctgctgtgaggaagtaaagggttaaatgtgggggaaccc 542
Query: 181 ccagtcctcctgcatgtgagcatctccatgttaataggacagttaaagaggaagctcttt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccagccctcctgcatgtgagcatctccatgttaataggacagttaaagaggaagctcttt 482
Query: 241 ggcaattgattgtataaatattttatctggagtaagtggccaggatgaagggctcttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcaattgattgtataaatattttatctggagtaagtggccaggatgaagggctcttgaa 422
Query: 301 gatgttcctgagagcagagtgaagggtaaaattagggcgctcttatggaagaaataagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgttcctgagagcagagtgaagggtaaaattagggcgctcttatggaagaaataagac 362
Query: 361 acaacagggagttacaaacacttgatccaaagtgtaaaaaaaaaacggtcccctcgtctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaacagggagttacaaacacttgatccaaagtgtaaaaaaaaaacggtcccctcgtctc 302
Query: 421 tgcagccagcagcctg 436
||||||||||||||||
Sbjct: 301 tgcagccagcagcctg 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
