Query= MSMg01no442_i15.b1 MSMg01no442_i15.b1 CHROMAT_FILE:
MSMg01no442_i15.b1 PHD_FILE: MSMg01no442_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:45 2005
(160 letters)
>mm_chr8_32872158_32872717
Length = 560
Score = 281 bits (145), Expect = 2e-80
Identities = 151/153 (98%)
Strand = Plus / Plus
Query: 5 gaattcatctagatgactcactcccttagctctgccacagaaggcttttataaactcata 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctagaggagtcactcccttagctctgccacagaaggcttttataaactcata 264
Query: 65 ctgaaatataaccctccacttggctgcaatcaagcaaagatgatgaattttcaggtagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgaaatataaccctccacttggctgcaatcaagcaaagatgatgaattttcaggtagtg 324
Query: 125 tggaagagaagaagaaggaagggggtgggggtg 157
|||||||||||||||||||||||||||||||||
Sbjct: 325 tggaagagaagaagaaggaagggggtgggggtg 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_i15.g1 MSMg01no442_i15.g1 CHROMAT_FILE:
MSMg01no442_i15.g1 PHD_FILE: MSMg01no442_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:45 2005
(322 letters)
>mm_chr8_33003272_33003993
Length = 722
Score = 571 bits (295), Expect = e-167
Identities = 313/325 (96%), Gaps = 12/325 (3%)
Strand = Plus / Minus
Query: 1 tctgcctttctccttcccagtttctcagagataaaaaaaccacaattcctttcaaaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tctgcctttctccttcccagtttctcagagataaaaaaaccacaattcctttcaaaataa 460
Query: 61 taaaacgacatactattttgcaaattgaggatatcaatttgtcaattaacctatggcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 taaaacgacatactattttgcaaattgaggatatcaatttgtcaattaacctatggcatt 400
Query: 121 ttaccatgtggctgaatctacagatttaccttgatggcatttaactgtgagttatggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttaccatgtggctgaatctacagatttaccttgatggcatttaactgtgagttatggtaa 340
Query: 181 tgaattgagttggatatagtgtctaacataattatgcctactattgttcaagtggttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgaattgagttggatatagtgtctaacataattatgcctactattgttcaagtggttggt 280
Query: 241 tgacta----ttttttt--tctccagttctgcattttcagaatgactgggagtggcgtgt 294
|||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgactagaag------tcatctccagttctgcattttcagaatgactgggagtggcgtgt 226
Query: 295 cccctagtcatcagtgtagttttgg 319
|||||||||||||||||||||||||
Sbjct: 225 cccctagtcatcagtgtagttttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
