Query= MSMg01no443_b02.b1 MSMg01no443_b02.b1 CHROMAT_FILE:
MSMg01no443_b02.b1 PHD_FILE: MSMg01no443_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:32 2005
(188 letters)
>mm_chr8_85714627_85715214
Length = 588
Score = 323 bits (167), Expect = 4e-93
Identities = 180/185 (97%), Gaps = 4/185 (2%)
Strand = Plus / Plus
Query: 5 gaattcctcacaa--ttccacgcctgtagccacacttcagaattgtgggtacctgtactg 62
||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcacaaaattg-a-gcctgtagccacacttcagaattgtgggtacctgtactg 262
Query: 63 tggggcttagaaagaggcagaaagggagagagcatctattatagctctagctatagcatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggggcttagaaagaggcagaaagggagagagcatctattatagctctagctatagcatt 322
Query: 123 cctatattatagcctgggtagttaacaagggttcaagacagtttgaccaaaacactcagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctatattatagcctgggtagttaacaagggttcaagacagtttgaccaaaacactcagc 382
Query: 183 tagct 187
|||||
Sbjct: 383 tagct 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_b02.g1 MSMg01no443_b02.g1 CHROMAT_FILE:
MSMg01no443_b02.g1 PHD_FILE: MSMg01no443_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:33 2005
(425 letters)
>mm_chr8_85920724_85921548
Length = 825
Score = 822 bits (425), Expect = 0.0
Identities = 425/425 (100%)
Strand = Plus / Minus
Query: 1 agtctgctcggctttgctggtgtctgcgggagtaagtatgcacaccacagctgtggtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtctgctcggctttgctggtgtctgcgggagtaagtatgcacaccacagctgtggtctc 566
Query: 61 agtgggaactgggatggagcacacatctggctcccagcaggggagtggggcacagtaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtgggaactgggatggagcacacatctggctcccagcaggggagtggggcacagtaacc 506
Query: 121 agtagttattatccctcacagaggtgcataccatctctgtggctgcaacagaaactcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtagttattatccctcacagaggtgcataccatctctgtggctgcaacagaaactcaga 446
Query: 181 gctgtctagtcaattgcccctgttaatctctaccttagagaataagcaaatgctgtgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctgtctagtcaattgcccctgttaatctctaccttagagaataagcaaatgctgtgtgc 386
Query: 241 attccaaatttgtgtctctttgtataaatacatagctttaaattatcccacaaggccacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attccaaatttgtgtctctttgtataaatacatagctttaaattatcccacaaggccacg 326
Query: 301 ggagcgctaattctcatagaccaatagcttcagaaaactcatcaaaccgaagaaaatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagcgctaattctcatagaccaatagcttcagaaaactcatcaaaccgaagaaaatgtg 266
Query: 361 ggaacactcacccagccagatttccactatcaaatgtttctgtaaaatatacttctccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaacactcacccagccagatttccactatcaaatgtttctgtaaaatatacttctccta 206
Query: 421 taggt 425
|||||
Sbjct: 205 taggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
