NCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACCGC
GGAATTCTGGGTTATTACCATTTGATGTTAGCAGATGTATTGAAACTTGT
TGTTAACCCTAAAATTTTGAAGGTGACAGTCATGACAAAGTTCTAAGATC
CATTCTGAGAACACATGCTTTTGGTAGTCACGACTGTACCCTTCTTCAGG
ATCATTTCTGAGCACGTGGTAGATTCCTTTCTGTCATTGTCATCTCCTGA
CCTCTGCCACTATCTCTATAGGAATTTGGACTCTTGCATGAAAGAAATCC
ATGCTGCTGTCTTTCTTATTCTTCTCGNCTTCATTCTGATACATTCTGGA
GCTGATCACGAGCTGTGAGATGTTTTTTTCAAATGATGCCTGCCAGACTC
TTATCTTTGTTAAGGAATCCCACAATGCCAACATCTGACAGTGAACTCCT
GCTTCAAGACCGTCATTGATGGATACTTACTGGACTGGGCTTACATTCTG
CACTTGATATAGGAATGTAGGCTATATTTCCCCGGGGCTCACACTCCATT
TACATTCCCATATGTGTCTTTAAATTCTGTTTTGATATCCCCCCCCGCGC
TTTGATTGTACGCCCCCAATATCGGAGAACCCTATTTCAACTCTCAGGCC
CCTATTTGCTGTTTTCTTCGACACACCAAGGAACCCATCCCCTTTTTAAT
TTTCTTTCCCACTTCTTTTCGACCCTTTTTCACCN

TTTCAATGCAGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTTTGAAAATATTTTGTGCTATAT
TAGTGCAAGTGAAATACACCAAATCAGTGAATTAGACAAACGTGACTCAC
CCAGCAAGCTATGCATATCTCAGCAAGCCAGAAATTTGGAAGTATAATGA
GAATGGAGAGAGAGAGTCTGTGGTTTCTATTTTCTTGACACTGTGTGGAA
GAGAATTCAAATCTACCAAACGAGATAGGTAAACACCAATCCAGCTCTAA
ACCCTTCTGTTTAAAATGGTAACCTGCCTGAAAGATACGCTGGTGCAGTA
GAGCCACAATGATTTGGGGGCTAAGCACCAACATCTAATTTGTTTTATGA
CTAACTCCTTGAGAGAGAACCCACCTACCTTGTTTTTGAGACAGAGTCTC
TCAGAGGCCTGGAATGCAGAAATCATCCAGGCTGGCTGGCCCACAGCCCC
AAGAATCCCCCCTTCCTGAGCTTGGACCATAGGCATGCTGCAATCCCTGG
TTTTTAAACATAGGTTTCAGAGATTAAACTCACGTCTTCCCATTCTGTAC
GGCCACAACATTAATTAAGCTATCCCTCCCCCTTCAACCCTTTATAGGAA
CCATTTATTTTATGCACGCCCTCTAACTTATCGCCACCTCATACAAACCC
ACTTTTTCCATAACACTTTTTTATTAATCGCTTAGCCTTCGCTCCTTTTT
ATCTATTCTT

Query= MSMg01no443_j13.b1 MSMg01no443_j13.b1 CHROMAT_FILE:
MSMg01no443_j13.b1 PHD_FILE: MSMg01no443_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:14 2005
         (243 letters)



>mm_chr8_100758542_100759184
          Length = 643

 Score =  439 bits (227), Expect = e-128
 Identities = 239/243 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttagcagatgtattgaaacttgttgttaaccctaaaattttgaaggtgacagtcatgaca 60
           |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttagaagatgtattgaaagttgttgttaaccctaaaattttgaaggtgacagtcatgaca 384

                                                                       
Query: 61  aagttctaagatccattctgagaacacatgcttttggtagtcacgactgtacccttcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagttctaagatccattctgagaacacatgcttttggtagtcacgactgtacccttcttc 324

                                                                       
Query: 121 aggatcatttctgagcacgtggtagattcctttctgtcattgtcatctcctgacctctgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 323 aggatcatttctgagcacgtggtagattcctttctgtcattgtcatctcctgagctctgc 264

                                                                       
Query: 181 cactatctctataggaatttggactcttgcatgaaagaaatccatgctgctgtctttctt 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 263 cactatctctataggaatttggactcttgcatgaaagaaacccatgctgctgtctttctt 204

              
Query: 241 att 243
           |||
Sbjct: 203 att 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space:   148356
Effective search space used:   148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no443_j13.g1 MSMg01no443_j13.g1 CHROMAT_FILE:
MSMg01no443_j13.g1 PHD_FILE: MSMg01no443_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:14 2005
         (394 letters)



>mm_chr8_100595006_100595799
          Length = 794

 Score =  739 bits (382), Expect = 0.0
 Identities = 391/394 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtttgaaaatattttgtgctatattagtgcaagtgaaatacaccaaatcagtgaattag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttgaaaatattttgtgctatattagtgcaagtgaaatacaccaaatcagtgaattag 260

                                                                       
Query: 61  acaaacgtgactcacccagcaagctatgcatatctcagcaagccagaaatttggaagtat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaacgtgactcacccagcaagctatgcatatctcagcaagccagaaatttggaagtat 320

                                                                       
Query: 121 aatgagaatggagagagagagtctgtggtttctattttcttgacactgtgtggaagagaa 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgagaacggagagagagagtctgtggtttctattttcttgacactgtgtggaagagaa 380

                                                                       
Query: 181 ttcaaatctaccaaacgagataggtaaacaccaatccagctctaaacccttctgtttaaa 240
           |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ttcaaatctaccaaacgagaaaggtaaacaccaacccagctctaaacccttctgtttaaa 440

                                                                       
Query: 241 atggtaacctgcctgaaagatacgctggtgcagtagagccacaatgatttgggggctaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggtaacctgcctgaaagatacgctggtgcagtagagccacaatgatttgggggctaag 500

                                                                       
Query: 301 caccaacatctaatttgttttatgactaactccttgagagagaacccacctaccttgttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccaacatctaatttgttttatgactaactccttgagagagaacccacctaccttgttt 560

                                             
Query: 361 ttgagacagagtctctcagaggcctggaatgcag 394
           ||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgagacagagtctctcagaggcctggaatgcag 594


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space:   302225
Effective search space used:   302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)