Query= MSMg01no445_p07.b1 MSMg01no445_p07.b1 CHROMAT_FILE:
MSMg01no445_p07.b1 PHD_FILE: MSMg01no445_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:20 2005
(433 letters)
>mm_chr8_89501676_89502508
Length = 833
Score = 712 bits (368), Expect = 0.0
Identities = 415/434 (95%), Gaps = 8/434 (1%)
Strand = Plus / Minus
Query: 1 gtgtatactggctctactggtggcgcctgggtacccagagaagagactgggtaccacatc 60
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtgtatactggctctactagtggtgcctgggtacccagagaagagactgggtaccacatc 453
Query: 61 attcatcccactccttgcctgctgtgtccccttcctgtccagcctgtaaggatttctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 attcatcccactccttgcctgctgtgtccccttcctgtccagcctgtaaggatttctgac 393
Query: 121 agcccagttggaaacatgggctgtggactcgatgtcacccaggcagccctggaataaagg 180
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 392 agcccagtgggaaacatgggctgtggactcgatgtcacccgggcagccctggaagaaagg 333
Query: 181 caggatggtgtataacataaaataatgggcgtcatgatgacattttcatgtatgcataca 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 332 caggatggtgtataacataaaataatgggtgtcatgatgacattttcatgtatgcataca 273
Query: 241 atgta-ttatatcatatcccttctcatgctcctctccacactacagctggctatgtcttt 299
||| | || |||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 272 atgcactt-gatcatatcccttctcatgttcctctccacactacagctgactatgtcttt 214
Query: 300 ttatatcttctttttttttaagttaaaatataattacatcactccctctcaaattcatgg 359
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttatatcttc------tttaagttaaaatataattacatcactccctctcaaattcatgg 160
Query: 360 ctgctttttaacttttattattattgttgttattatatgtgtgtataaataagtatgtaa 419
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ctgctttttaacttttactattattgttgttattatatgtgtgtataaataagtatgtaa 100
Query: 420 atacaacctgctga 433
||||||||||||||
Sbjct: 99 atacaacctgctga 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_p07.g1 MSMg01no445_p07.g1 CHROMAT_FILE:
MSMg01no445_p07.g1 PHD_FILE: MSMg01no445_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:21 2005
(432 letters)
>mm_chr8_89327945_89328777
Length = 833
Score = 830 bits (429), Expect = 0.0
Identities = 432/433 (99%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 1 ctttctctctgccagatattccaccttctattctctcctgcctttctatagtctattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttctctctgccagatattccaccttctattctctcctgcctttctatagtctattcag 260
Query: 61 ctctttattggcaggtgatgctcttacatggtgcacaagagagtgtccctacaaggctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctttattggcaggtgatgctcttacatggtgcacaagagagtgtccctacaaggctat 320
Query: 121 tttgcttccacattgtaacaggtcaggacttggcttaagcagggcttactgattttataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgcttccacattgtaacaggtcaggacttggcttaagcagggcttactgattttataa 380
Query: 181 aatgaccccagagacac-gctctatttcatgttgttgataatcaggggctccagtgaacc 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgaccccagagacacagctctatttcatgttgttgataatcaggggctccagtgaacc 440
Query: 240 acaatgtccccctcatttttcatgcatgaggtttaaattgagtgattagctctctgatat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaatgtccccctcatttttcatgcatgaggtttaaattgagtgattagctctctgatat 500
Query: 300 acgtgtgtatgtgtgtatctatacagctttgaccgtgcacgacctggttaggtgaacaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgtgtgtatgtgtgtatctatacagctttgaccgtgcacgacctggttaggtgaacaat 560
Query: 360 gacaacacagtcagtgcttttaatttttttaatttagtttttgtgtatgcatgttttgca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacaacacagtcagtgcttttaatttttttaatttagtttttgtgtatgcatgttttgca 620
Query: 420 tgagtgtttgtct 432
|||||||||||||
Sbjct: 621 tgagtgtttgtct 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 833
Length adjustment: 9
Effective length of query: 423
Effective length of database: 824
Effective search space: 348552
Effective search space used: 348552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
