Query= MSMg01no446_n22.b1 MSMg01no446_n22.b1 CHROMAT_FILE:
MSMg01no446_n22.b1 PHD_FILE: MSMg01no446_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:31 2005
(539 letters)
>mm_chr8_70388987_70389925
Length = 939
Score = 967 bits (500), Expect = 0.0
Identities = 527/536 (98%), Gaps = 2/536 (0%)
Strand = Plus / Plus
Query: 5 gaattctagcatacttttcgtggcagattataaagcaattttaacttattgtaaatcaat 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagcatacttttagtggcagattataaagcaattttaacttattgtaaatcaat 264
Query: 65 ttaaattacacatgtatggttatgtggagataaagccatgtcacaatgttgaataatgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaattacacatgtatggttatgtggagataaagccatgtcacaatgttgaataatgaa 324
Query: 125 attgagctaattaaacctacttttatggtaagaacattttttaaatttgttcagcctttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgagctaattaaacctacttttatggtaagaacattttttaaatttgttcagcctttt 384
Query: 185 ggttaaagtcaagtgtagtagctgttattcacttaaagcaagtatgtttaaaggatatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttaaagtcaagtgtagtagctgttattcacttaaagcaagtatgtttaaaggatatta 444
Query: 245 aaaaattaagtgaaaatggcacaagagttgtctttagaaaattagtagttctttccagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaaattaagtgaaaatggcacaagagttgtctttagaaaattagtagttctttccagaa 504
Query: 305 gcactgaagtaatcgcagagagtgcactagcaaatgagaatatctcatgcttggcgaatg 364
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 505 gcactgaagtaatcgcagagagtgcactagcaaatgagaataactcatgcttggcga-tg 563
Query: 365 -ccttgttcatgagcaagctcgcatgcaagagtttgcagaccgactgcaagatagacatt 423
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccttgttcatgagcaagctcacatgcaagagtttgcagaccgactgcaagatagacatt 623
Query: 424 atcaagcaaacattagatgaacaacctgcagagaagttgacagcccaaacggcagctgct 483
|||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||
Sbjct: 624 atcaagcaaacattagatgaacaacctgcagagaggttgacagcccaagcagcagctgct 683
Query: 484 gtacaagaattgtatccttgagccagctccttccctggagaacagagcttttccca 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 684 gtacaagaattgtatccttgagccagctccttccctggagaacagggcttttccca 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_n22.g1 MSMg01no446_n22.g1 CHROMAT_FILE:
MSMg01no446_n22.g1 PHD_FILE: MSMg01no446_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:31 2005
(383 letters)
>mm_chr8_70565858_70566640
Length = 783
Score = 507 bits (262), Expect = e-148
Identities = 297/318 (93%), Gaps = 16/318 (5%)
Strand = Plus / Minus
Query: 70 aacccactcaactttgtgcc----tcttttttttttttttttaattagaggtccaatttg 125
|||||||||||||||||||| | |||||||||||||||| |||||||||||||||||
Sbjct: 783 aacccactcaactttgtgcctttttttttttttttttttttttattagaggtccaatttg 724
Query: 126 tgctggccagatctatccattgcaaagtaaacatcaaaacaaacaaaaacaaaaccaacc 185
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 723 tgctggccagatctatccattgcaaagtaagcatcaaaacaaacaaaaacaaaaccaacc 664
Query: 186 aacaaccaaaaaacccaaaacccaagccgaaaaccaaaacaaaaaaaacaaccaaccagc 245
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 663 aacaaccaaaaaacccaaaacccaaaccgaaaaccaaaacaaaaaaaacaaccaac---- 608
Query: 246 caaccattcaaaaaaaccaaacaaccccccaaaaggtaacttttagagaaaacccaaatg 305
||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 607 --------caaaaaaaccaaacaaccccccaaaaggtaatttttagagaaaacccaaatg 556
Query: 306 agggtagggtgaacaaaggtctagcgaggaaggagctgaggaaggaaatgggctcatttc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agggtagggtgaacaaaggtctagcgaggaaggagctgaggaaggaaatgggctcatttc 496
Query: 366 tgaaccctacactatagt 383
||||||||||||||||||
Sbjct: 495 tgaaccctacactatagt 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
