Query= MSMg01no448_a05.b1 MSMg01no448_a05.b1 CHROMAT_FILE:
MSMg01no448_a05.b1 PHD_FILE: MSMg01no448_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:07 2005
(419 letters)
>mm_chr8_11303624_11304442
Length = 819
Score = 505 bits (261), Expect = e-147
Identities = 345/419 (82%), Gaps = 70/419 (16%)
Strand = Plus / Plus
Query: 1 taaaatcgttcagtttttttcaattctcaagtatttgggaaagcaaaatctaattacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaatcgttcagtttttttcaattctcaagtatttgggaaagcaaaatctaattacaaa 260
Query: 61 gaaggcgcccaacggtggccgggccagcctggggtaatacagtgatagaagcatgtggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggcgcccaacggtggccgggccagcctggggtaatacagtgatagaagcatgtggcc 320
Query: 121 agcctggggtaatacagtgatagaagcatgtggccagcctggggtaatacagtgatagaa 180
|||||||||||||||||||||||||||||||||
Sbjct: 321 agcctggggtaatacagtgatagaagcatgtgg--------------------------- 353
Query: 181 gcatgtggccagcctggggtaatacagcgataagagcatgtggtctggccccagccttgc 240
|||||||||||||||||
Sbjct: 354 -------------------------------------------tctggccccagccttgc 370
Query: 241 aagctaaagtgtcagtctgtgatcagctctagacaaggcatatgtcagaagaactcaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagctaaagtgtcagtctgtgatcagctctagacaaggcatatgtcagaagaactcaccc 430
Query: 301 acctcataaacagtcatgaaccccagtgtgcccaccatcctaagctgagttcgtatatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acctcataaacagtcatgaaccccagtgtgcccaccatcctaagctgagttcgtatatac 490
Query: 361 agccaaagtaagcctatctggtcgagagactaagtgattatcggatagctagcatgccc 419
||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||||
Sbjct: 491 agccaaagtaagcctatctggtccagagactaaatgactatctgatagctagcatgccc 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_a05.g1 MSMg01no448_a05.g1 CHROMAT_FILE:
MSMg01no448_a05.g1 PHD_FILE: MSMg01no448_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:07 2005
(430 letters)
>mm_chr8_11488678_11489506
Length = 829
Score = 746 bits (386), Expect = 0.0
Identities = 419/430 (97%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 1 tgcttcaggtacaatgaagtgttttaggacctctggccactcaggggtttctgagaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 629 tgcttcaggtacaatgaagtgttttaggacctctggccactcaggggtttctgag-acaa 571
Query: 61 cacagacattgtatttagaacaagttggttttctttgcaaaagtaaatagcctgtgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 570 cacagacattgtatttagaacaagttggttttctttgcaaaagtaaatagcctgtgtgag 511
Query: 121 ggcaggctcaaagtcactgtgccacttaccaaatgtcggagaaattcttagtttagacaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 510 ggcaggctcaaagtcactgtgccacttaccaaatgtcggagaagttcttagtttagacaa 451
Query: 181 accataagaacggtaattgagaagtagatgtgtgtggccgcaggtcatcctggagaaagc 240
||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 450 accatgagaacggtaattgagaagtagatgtgtgtggccgcaggtcgtcctgaagaaagc 391
Query: 241 tgatgagagatgacactccaaacagagagagaacagtttgtcttaagagaggtggggacg 300
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 390 tgaggagagatgacactccaaacagagagagaacagtttgtcttaagagaggcggggacg 331
Query: 301 ggagcaggctttaaatcacgtggttacactccccactgctgctgcctcgtcacaggtcac 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 330 ggagcaggctttaaatcacgtggttacactccccactgctgctgcctcatcacaggtcac 271
Query: 361 cctgcactagaagtcagacaggctgtttctgtccgttcccatcagtcctgatgctctcta 420
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 270 cctgcactagaactcagacaggctgtttctgtcctttcccatcagtcctgatgctctcta 211
Query: 421 tcctggagga 430
||||||||||
Sbjct: 210 tcctggagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 829
Length adjustment: 9
Effective length of query: 421
Effective length of database: 820
Effective search space: 345220
Effective search space used: 345220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
